LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g0189	ATGGAAAACGAGCCTCTGCTCGCCTATTTCAGTCCCAGAAAGATGACTCCGCCCTCGCATCTCACGCCACTGCACGAGGAAGACGACATAGTCCTTCATCTGAACCCGTCGGAGATCAAGGACCGCCTCATCTTCGGCCCTTCGACTTCCACCGCAGATTCTGCTCCCTTAGTTGATGCATTGACGCTTTCGCTCCATTCGCCaaaaccttcttcttcttcttcttcctcttctcccgcGCATGATCTTTTCACTTCTCTCCTCGATTCGAAATCTCAACAAACGCAGCCCAATCGCAAGTTACGAAAACCTATTTTCCATCGATGCAAAACGGCGCCGGCTATGGTTGTGTTCAGCCATAATAACCACCCGCCCTCTTTGCCTAAACCCCAATTCGGTTCAAATTCAATTGTTCGCCAAGCGGTTATTCTTCTTTTTGCTTATTTGTCATTAGGAGTGATTATTTATTGGATAAATCGGCATAATTTTACTGCAACTGAGACTAACCCTATTGTGGATGCACTGTATTACTGTGTGGTGACAATGTGTACAATAGGGTACGGTGATATCACTCCCAATAGTGCAGCAACGAAGATTTTCTCTATTCTGTTTGTGttggtgggttttgggtttattgacATATTGCTGAGTGGGATGGTAAGTTATATGCTTGATTTGCAGGAGAATCACTTGCTTAGGACAGTCAAAAGTAGGGGTGAGAAGGATACAAgatcatatataattgatgTGAAGAAGGGGAGGATGAGGATTAGGATGAAGGTGGCCTTTGCTTTGGGGGTTGTGGTTCTTTGTATTGGAGTTGGTGCGGGTGTTATGCATTATGTGGAGAGGCTTGGTTGGGTGGACTCTGTGTATCTTTCTGTTATGTCAGTTACTACTGTTGGCTATGGCGATCATACATTCAAGTCCATGTCTGGTCGAATATTTGCTGCTATTTGGTTGCTTGTATCAACACTTGCAGTTGCACGAGCTTTCCTTTATTTAGCTGAGGCAAGAGTGGATAAGCGGAATAGAAGCATGACAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCTGACTTGGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGTTGGGAAGAGTGTCAGAGAAGGACATCATGCAGGTCAGTGAGAAGTTTGATAGGCTAGATACAGGCAACTGTGGAAAAATAACTCTTGCTGATCTCATGGAAGCTCGTCCTCAATAA	1269	0.4177	MENEPLLAYFSPRKMTPPSHLTPLHEEDDIVLHLNPSEIKDRLIFGPSTSTADSAPLVDALTLSLHSPKPSSSSSSSSPAHDLFTSLLDSKSQQTQPNRKLRKPIFHRCKTAPAMVVFSHNNHPPSLPKPQFGSNSIVRQAVILLFAYLSLGVIIYWINRHNFTATETNPIVDALYYCVVTMCTIGYGDITPNSAATKIFSILFVLVGFGFIDILLSGMVSYMLDLQENHLLRTVKSRGEKDTRSYIIDVKKGRMRIRMKVAFALGVVVLCIGVGAGVMHYVERLGWVDSVYLSVMSVTTVGYGDHTFKSMSGRIFAAIWLLVSTLAVARAFLYLAEARVDKRNRSMTKWILGQDMTVSEFLAADLDNNGFVSKSEYVIYKLKELGRVSEKDIMQVSEKFDRLDTGNCGKITLADLMEARPQ	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g0189	422	PANTHER	TWO-PORE POTASSIUM CHANNEL 3	89	416	-	-
	Sto2g0189	422	SUPERFAMILY	Voltage-gated potassium channels	134	224	-	-
	Sto2g0189	422	PANTHER	POTASSIUM CHANNEL, SUBFAMILY K	89	416	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Sto2g0189	422	Pfam	Ion channel	268	336	IPR013099	-
	Sto2g0189	422	Pfam	Ion channel	143	223	IPR013099	-
	Sto2g0189	422	Gene3D	-	330	421	-	-
	Sto2g0189	422	PRINTS	Two pore domain K+ channel signature	180	208	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Sto2g0189	422	PRINTS	Two pore domain K+ channel signature	299	308	IPR003280	GO:0005267\|GO:0016020\|GO:0071805
	Sto2g0189	422	SUPERFAMILY	Voltage-gated potassium channels	251	356	-	-
	Sto2g0189	422	Gene3D	-	135	236	-	-
	Sto2g0189	422	ProSitePatterns	EF-hand calcium-binding domain.	365	377	IPR018247	-
	Sto2g0189	422	Gene3D	-	266	329	-	-
	Sto2g0189	422	SUPERFAMILY	EF-hand	360	418	IPR011992	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g0189	Sto-Chr2	1568539	1571294	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g0189	1	419	Ion Channels	AT4G18160	58.257	2.67e-173	490

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto2g0189	K05389		-	gmx:100804249	591.267