Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0183 ATGAAGGAAATGGGTATTAAAGGTTCAACAAGTGTTATGGATGAAACTGGGATACAACTTCAGCTAGAAGCATTTAAAAACCTTTTGCACAAAGGTTCTGATCATGATTATGGAAAAAGATGCAATAATCTAATTTtacaaaaagagaaaaggtGGAGGAACGCTGTGTACACAAAATTAGGGACCAATCTGCAGCCTGCTTGGCTAGTTGATCAGAAGAAGAATCGGATAAGGACACACGTTATTTATGACATAGTTATAAGTGCAAAGAACATATTGGGTATTAAGACCTCAAGTGCTATGGATGAATTCGAACTAGTTGGGATACAACCTCATCTAGAAGCATTACAAAACCTTGTGGACTTAGCTTCTAATAATGATGTTGTTGGAGTGATAGGCATTTGTGGGATGCGTGGCTCAGGAAAAACAACTCTTGCTTCACTTTTGTACAACAGAATCTCTCACAAGTTTGATGCTTTTTGTTATGTGGCTAATGTACGTTTAGTTTCTGCCATACCCAACGGTGTATCTTATCTACCACAACAGATTCTAAGTCAAATTCTACAAGAAGAAGATTTGAAGATAAGTGGTGTTGAACAAGGATCCTCAATAATAGCCACAAGGCTAAGAAACCTCAAGATTCTGCTAGTTCTTGATGATGTTCGTGATATGCAAATGTTAAAGGTATTACTTAGAATTCGTGATTGGTTTGGTGTAGGGAGTAGAATCATCGTAACTAGCAGAGATGAGCATATACTTAAAAGCTATGGAGTGGATCAAATATACAAGACTCTGCCCAACTTGAGAAACTTGGATCTGCATGGCTCTAAAAATCTAATGGAGACACCACATTTTGAAAGGCTTCCAAAACTTGAGAAGCTAAATGTTGAAGGATGTATTGCATTAGTGGTGCTTGATCCATCCATTACATTTCTCACAAACCTCAAATTCTTGAATCTGAGAAACTGCACAACTCTTGTCAGTCTGCCAAACAACTTATTCAACCTAAGTTCACTTGAAGTTCTAAATCTTGCTGGCTGCTCAAAATTTGCAGAATGTTTAGATTTTGATGATAATTGGACGAGCTCAACAGAAGGGGATGAGGAAgAAATAGGAAAACAGTTGGTGGCTGGTGGAAAGAGTATTGAGGGAACTAGCTCCACAATAACAGCAGATAAATATCCCACATCTAAGTGTATTGTGGCTCTTGATGAGTTTGAAGGCGTTTCTGATAAATCTTATGTGAAGGCATTAGAAAATTTTCAAGATCCATATTGGAGAGAAGCATTCCTTACTATGTCCGATAAGGGAAAGAAAGTATGGTTAAACAATCTTGTATGA 1341 0.3699 MKEMGIKGSTSVMDETGIQLQLEAFKNLLHKGSDHDYGKRCNNLILQKEKRWRNAVYTKLGTNLQPAWLVDQKKNRIRTHVIYDIVISAKNILGIKTSSAMDEFELVGIQPHLEALQNLVDLASNNDVVGVIGICGMRGSGKTTLASLLYNRISHKFDAFCYVANVRLVSAIPNGVSYLPQQILSQILQEEDLKISGVEQGSSIIATRLRNLKILLVLDDVRDMQMLKVLLRIRDWFGVGSRIIVTSRDEHILKSYGVDQIYKTLPNLRNLDLHGSKNLMETPHFERLPKLEKLNVEGCIALVVLDPSITFLTNLKFLNLRNCTTLVSLPNNLFNLSSLEVLNLAGCSKFAECLDFDDNWTSSTEGDEEEIGKQLVAGGKSIEGTSSTITADKYPTSKCIVALDEFEGVSDKSYVKALENFQDPYWREAFLTMSDKGKKVWLNNLV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0183 446 Gene3D Ribonuclease Inhibitor 257 381 IPR032675 -
Sto2g0183 446 Gene3D - 93 256 IPR027417 -
Sto2g0183 446 PRINTS Disease resistance protein signature 131 146 - -
Sto2g0183 446 PRINTS Disease resistance protein signature 208 222 - -
Sto2g0183 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 263 IPR027417 -
Sto2g0183 446 Pfam NB-ARC domain 122 258 IPR002182 GO:0043531
Sto2g0183 446 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 104 261 IPR044974 GO:0006952
Sto2g0183 446 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 270 360 IPR044974 GO:0006952
Sto2g0183 446 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 104 261 - -
Sto2g0183 446 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 270 360 - -
Sto2g0183 446 SUPERFAMILY RNI-like 253 353 - -
Sto2g0183 446 CDD AAA 113 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0183 Sto-Chr2 1521320 1524924 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0183 104 263 WRKY Transcription Factor Family AT5G45050 33.125 4.20e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0183 - - cit:102619214 159.073