Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0165 ATGGCCGTGCCGCTTCTTTCTAAGAAAATTGTGAAGAAGAGGGTTAAGAAGTTTAAGAGGCCGCAGAGCGATCGCAAGATCTCTGTTAAGTGTTGGAAAGGACGTGATGATAGATATTGTCGCCCCAGTCTTAATTTGCACCACTTGGGTGAAAACTGGCGCAGACCAAAGGGTATAGATTCTCGTGTCAGGAGAAAGTTTAAGGGATGCACTTTGATGCCAAACATTGGTTATGGTTCAGACAAGAAGACTCGCCATTATCTCCCTAACGGTTTCAAGAAATTTGTTGTGAACAATGTCAAAGAGCTGGAATTGCTCATGATGCACAACAGGACATACTGTGCTGAGATTGCTCACAATGTCTCCACAAGGAAGAGAAAGGAGATAGTTGAGAGAGCTGCCCAGCTTGATGTTGTTGTGACAAACAAAACAGCCAGACTACGCAGCCAAGAGGATGAATAG 462 0.4437 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKCWKGRDDRYCRPSLNLHHLGENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0165 153 Pfam Ribosomal protein L32 46 142 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto2g0165 153 SMART Ribosomal_L32e_2 15 142 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto2g0165 153 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 36 153 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto2g0165 153 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 32 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto2g0165 153 CDD Ribosomal_L32_L32e 37 142 IPR001515 GO:0003735|GO:0005840|GO:0006412
Sto2g0165 153 SUPERFAMILY Ribosomal protein L32e 32 151 IPR036351 -
Sto2g0165 153 PANTHER 60S RIBOSOMAL PROTEIN L32-1 36 153 - -
Sto2g0165 153 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0165 Sto-Chr2 1378127 1380257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0165 1 153 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 75.163 7.90e-80 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0165 K02912 - gmx:100499946 238.81