Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0150 ATGGGAATACATGGCCTTTTGCCCCAATTGAAATCGATTATGGTACCAATCCACATTAAGCAGTTCGAGGGCTGCTATGTGGCGGTAGATACATATTCTTGGCTCCACAAAGGTGCCTTTTCTTGCAGTGCGGAGCTTTGCAAAGGGCTACCCACATCCAGGCACATTGAGTATTGCATGCGTAAAGTAAATTTGCTGCGGCACTATGGTGTTAAGCCTATTCTTGTATTTGATGGAGGTCTTCTACCAATGAAGAGTGAACAAGAGAACAAGCGTGCAAGAGTGAGAAAGGAAAATCTTGCACGTGCAGTTGAACATGAGGCAGATGGAAATTCTGCTGCCGCTTTTGAGTGCTACCAGAAAGCTGTTGATATCTCACCTCTAATTGCAGCTCAACTGATTCAGGTGTTGAAGCAGGAGAATGTGAATTATATTGTTGCTCCTTATGAGGCAGATGCCCAGATGACATTCTTGGCAATCAGCAAACAGGTTGAAGCCGTTATAACTGAAGACTCTGATCTTATACCATTTGGTTGCCCAAGAattatCTTTAAAATGGACAAGCTTGGTCAAGGTGTTGAGTTTCAGTATTCCATGCTACAAAAGAACAAGGAGCTTAGTTTTGAAGGATTTAACAGAAAAATGCTTCTCGAGATGTGTATATTGAGTGGTTGTGACTATCTGCAGTCCTTGCCGGGAATGGGCCTCAAAAGGGCTCAtgcaattattaaaaaatttaaaagttatgacaAGGTTCTTAAGCACTTGAGATTCAGTGGTGTTTCTGTCCCCCCCTCTTATGAGGATTCATTCAAGAAGGCTATATTGACTTTCCAATATCAGCGAGTTTATGATCCTATCAGTGAAGATATTGTCCATTTGTCTGATATACCAGCTGATATTGCTAGGTATTGTTTCATCACTCTTTCTAGTTACAAAGTGGGAGTTACTATCAACAATGCACATGTTTCTATTGAGACCATAGCTATGTCACTTTTGGTAGACAATCTTACTGCTGGATTGGCAGTAGAGAGAACTTCACAACTCAAAATTTCTCCTGAAATTGCAAAGAAAAAGATAGATCTACCAGTGCAGAAGAATCTATTGACAAAGTATTTTTCCTTGAAAGGTTTTGCTTCTCTTGAAGCGAAAAGGAAATTCAGAGCACCTCGGATGTCACCTACTTCTGCAAATCAAACTACATTGGATTCTCCTTCTGTCAGTCCCCAGGACAATGACAGTTTGGAGGTTGCTGCTACTGAAACAAAGAGCTCTGCTGCATCCTTAGTTGATTCTGAAATTTTGGGCAATGTTCCTCCTGTTAATAACCATATTGAAGATAGGTTTTCCACCAAAATTATAGAGTTAACAGAATCTTCATCTCATGACCTGATGGGTAAGAAGAGGAAAAGTTCAGAACATACTATACTCCAACAACCCATGCAGCCAATTCATAAACCTTGTCTGGGTTTACAAAGGGAGCATGAGGATACGAATGTCAAAGACACAGTTGAGGGAAAAACCAGAGAGGCAACCAGAAAGGTCATTGTTAGAAGTGCTTATTTTCAGCATAAGCGAGTTGAAAAGAATAACTCTGACAAAAAGCAAGACTGTTTGGTCAATTCTGATATGACCATTGATGTGCATAAAAATACCATATCTGACAGTGCTAATCACCATATGGAAAGCAAAGTCCTGAAAAGGAAGATCTCCCCCAATGATAGTGTTCAAAGTGAAAATTTGCGGCCCAGGCACATCCATCCTGTATCGTCTTTTCCTGATAATGGTTATTGTGATCAGAAATCTGATAGGACATTTACAGAGGACAATGCTGAAGAAGGAAAGTTTGGTGCAAATATTTCTCATTTAGACCGTTATTCACAAATAGCAGAGAAGTCCATGGAAAAATTTGTCTCAGTTATATCATCCTTCAGATGCTCCTCATCTGGTTCTCGAGCCAGTGGTCTCCGTGCTCCTCTGAGAGATGTTCAAAACACTTCTAACAACAGGCCAGCAACTTTGGACTTCAAACAATATGCATATGTgccaaacaaacaaaagaatgGCAGAAAAGGTTGCTGA 2082 0.3972 MGIHGLLPQLKSIMVPIHIKQFEGCYVAVDTYSWLHKGAFSCSAELCKGLPTSRHIEYCMRKVNLLRHYGVKPILVFDGGLLPMKSEQENKRARVRKENLARAVEHEADGNSAAAFECYQKAVDISPLIAAQLIQVLKQENVNYIVAPYEADAQMTFLAISKQVEAVITEDSDLIPFGCPRIIFKMDKLGQGVEFQYSMLQKNKELSFEGFNRKMLLEMCILSGCDYLQSLPGMGLKRAHAIIKKFKSYDKVLKHLRFSGVSVPPSYEDSFKKAILTFQYQRVYDPISEDIVHLSDIPADIARYCFITLSSYKVGVTINNAHVSIETIAMSLLVDNLTAGLAVERTSQLKISPEIAKKKIDLPVQKNLLTKYFSLKGFASLEAKRKFRAPRMSPTSANQTTLDSPSVSPQDNDSLEVAATETKSSAASLVDSEILGNVPPVNNHIEDRFSTKIIELTESSSHDLMGKKRKSSEHTILQQPMQPIHKPCLGLQREHEDTNVKDTVEGKTREATRKVIVRSAYFQHKRVEKNNSDKKQDCLVNSDMTIDVHKNTISDSANHHMESKVLKRKISPNDSVQSENLRPRHIHPVSSFPDNGYCDQKSDRTFTEDNAEEGKFGANISHLDRYSQIAEKSMEKFVSVISSFRCSSSGSRASGLRAPLRDVQNTSNNRPATLDFKQYAYVPNKQKNGRKGC 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0150 693 Gene3D - 209 281 - -
Sto2g0150 693 SMART HhH_4 213 246 IPR008918 GO:0003677|GO:0003824
Sto2g0150 693 MobiDBLite consensus disorder prediction 389 419 - -
Sto2g0150 693 MobiDBLite consensus disorder prediction 392 419 - -
Sto2g0150 693 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 211 305 IPR036279 -
Sto2g0150 693 Pfam XPG N-terminal domain 1 98 IPR006085 GO:0004518
Sto2g0150 693 ProSitePatterns XPG protein signature 1. 71 85 IPR019974 GO:0016788
Sto2g0150 693 CDD H3TH_EXO1 215 285 IPR037315 GO:0003677|GO:0035312
Sto2g0150 693 MobiDBLite consensus disorder prediction 568 594 - -
Sto2g0150 693 CDD PIN_EXO1 1 202 IPR044752 GO:0046872
Sto2g0150 693 MobiDBLite consensus disorder prediction 647 672 - -
Sto2g0150 693 PANTHER EXONUCLEASE 1 1 669 IPR032641 GO:0006281|GO:0035312
Sto2g0150 693 Gene3D - 1 207 - -
Sto2g0150 693 SMART xpgineu 138 208 IPR006086 GO:0004518
Sto2g0150 693 SMART xpgn3 1 99 IPR006085 GO:0004518
Sto2g0150 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 24 38 IPR006084 -
Sto2g0150 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 73 92 IPR006084 -
Sto2g0150 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 137 154 IPR006084 -
Sto2g0150 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 158 178 IPR006084 -
Sto2g0150 693 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 216 231 IPR006084 -
Sto2g0150 693 SUPERFAMILY PIN domain-like 2 226 IPR029060 -
Sto2g0150 693 Pfam XPG I-region 141 226 IPR006086 GO:0004518
Sto2g0150 693 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 669 IPR006084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0150 Sto-Chr2 1274511 1281273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0150 1 267 Core DNA Replication Machinery Family AT5G26680 26.690 3.32e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0150 K10746 - gmx:100798062 848.58