Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0126 ATGGCTACAGAGGTGGTTTTGAATGTAAATGGAGATCACAAGGCCAACGAAGACTCTTCTGGAATCCACGTCTCTGTTCCTTTCTTGCAGAAGTTGGTGGCGGAATTGGTGGGGACGTACTTCTTGATATTTGCGGGGTGTGGATCGGTGGTGGTGAATAAGAGCTATAACAACATCATAACAATGCCTGGGATTGcgattgtttggggtttggttgtGACGGTTCTGGTTTACTCGGTGGGTCATATTTCGGGTGCCCATTTCAATCCGGCGGTCACTTTGGCTTTTGCTTCCACCAGAAGGTTTCCTCTCAAACAGGTTCCTGCTTATATATTAACCCAAGTGCTTGGATCCACTCTTGCAAGTGGAACTCTCAGACTTATCTTCAATGGCACTCATGACGAATTTTCTGGAACACTTCCAAATGGAATCAACAATCTCCAGACCTTCGTCATTGAATTCATCATCACCTTCTACCTCATGTTCGTTATCTCCGGTGTCGCAACCGATAACAGAGCCATTGGTGAGCTGGCTGGGCTTGCTGTTGGGTCTACGATTCTGCTAAATGTGATGTTTGCAGGGCCGGCGACAGGAGCATCAATGAACCCAGCAAGAAGCTTAGGGCCAGCCATTGTGTCTCACGAATACAAGTCAATTTGGGTATACTTGATATCACCTGTTTTGGGTGCAGTGGCTGGTGCATGGACCTACAACATTATAAGGTATACAGACAAGCCATTGCGTGAGATCACAAAAAGTGGCTCTTTCCTCAAAGCTTCAAGCCGTGCTACTTCCTCCAGCTGA 804 0.4565 MATEVVLNVNGDHKANEDSSGIHVSVPFLQKLVAELVGTYFLIFAGCGSVVVNKSYNNIITMPGIAIVWGLVVTVLVYSVGHISGAHFNPAVTLAFASTRRFPLKQVPAYILTQVLGSTLASGTLRLIFNGTHDEFSGTLPNGINNLQTFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGSTILLNVMFAGPATGASMNPARSLGPAIVSHEYKSIWVYLISPVLGAVAGAWTYNIIRYTDKPLREITKSGSFLKASSRATSSS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0126 267 Pfam Major intrinsic protein 25 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 3 260 - -
Sto2g0126 267 SUPERFAMILY Aquaporin-like 25 251 IPR023271 -
Sto2g0126 267 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Sto2g0126 267 PRINTS Major intrinsic protein family signature 30 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PRINTS Major intrinsic protein family signature 69 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PRINTS Major intrinsic protein family signature 106 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PRINTS Major intrinsic protein family signature 152 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PRINTS Major intrinsic protein family signature 183 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 PRINTS Major intrinsic protein family signature 220 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 ProSitePatterns MIP family signature. 87 95 IPR022357 -
Sto2g0126 267 PANTHER AQUAPORIN NIP2-1 3 260 IPR034294 -
Sto2g0126 267 TIGRFAM MIP: MIP family channel proteins 34 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto2g0126 267 CDD MIP 30 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0126 Sto-Chr2 1088448 1091019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0126 30 267 Major Intrinsic Protein MIP AT5G37810 62.605 8.43e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0126 K09874 - gmx:100812577 397.512