Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0118 ATGAATAATGGTGGAAAGACATACGATGCAGTGGTTGGAGACATGACGATACTATCAGAGAGATTGGAATATGTGGATTTTACAGTGCCATATGCAGAATCAGGATTGTCAATGATAGTTCCTTCCAAGTCTCAAGAGTCAGCATGGATGTTTTTGAAGCCCTTCACTTGGCAATTGTGGGTCATTACTGGAGTCAGCTTGTTTTACACTATGTTAGTAGTTTGGTACCTTGAGAAAGTACCCAATCCAGAATTTCATGGCAATTTCGGAAGCCAGATTAGTACTGCTCTTTGGTTCACCTTCTCCTCTCTATTCTTTGCTCATAGAGAGAAAATGTACAGCAACTTATCTCGTGTGGTGATGGTAGCATGGCTGTTTCTAGTTATGATATTGAATTCAAGTTATACTGCGAGCCTTTCTTCAATGCTCACAGTTCAACAACTACGGCCAAATGTGACAAGCATGGAGTGGTTGAAGAGGAACAACGCAAAGATTGGTTGTGATGGTGATTCATTTGTGAGGACTTACCTAGAGAAAGTAGAAAGTTTCAGGCCAGAAAACATCATCAATGTTAATAGTGAATACAATTATGATGATGAGTTCAGAAACAACTCCATAGCAGCTGCTTTTCTTGAACTCCCATATGAAAAAGTATTCATCAATAAATATTGCAAGGGATACTCTGGCTTCACCCCCACCCTCAGATTTGGAGGACTAGGCTTCATGTTCCAAAAGGGATCCCCTGTGGTAAAAGATGTTTCAAAAGCTATATTGGAGCTATCAGAAAAAGGAGAGTTGAAAAACTTGGAAGCAAAATGGTTGTATTCCTCAAACGAGTGCTCCAACAACACAGGTTCCAAGAATACAGAAAGTTTGAAGCTTGGAAGTTTCTGGGTTCTCTATGCCTTTTCTGGTATTACTTCAACCATTTGCGTACTATTTTCTATCATGCCATCTCTAAGCTTAAGCAATATGAGCATTTGGATAAGAGCTATTCAATTAGCTAAGTATATTTATAGCAGAAAGCTTAATATGGAAAGTGAGGCACGGCAAGATGTACCAGCAATCATAATGCTCCCTTCTCCACCAACTCTAGAAATACAAATGGAAAATCCACCCTATAGATAA 1128 0.3927 MNNGGKTYDAVVGDMTILSERLEYVDFTVPYAESGLSMIVPSKSQESAWMFLKPFTWQLWVITGVSLFYTMLVVWYLEKVPNPEFHGNFGSQISTALWFTFSSLFFAHREKMYSNLSRVVMVAWLFLVMILNSSYTASLSSMLTVQQLRPNVTSMEWLKRNNAKIGCDGDSFVRTYLEKVESFRPENIINVNSEYNYDDEFRNNSIAAAFLELPYEKVFINKYCKGYSGFTPTLRFGGLGFMFQKGSPVVKDVSKAILELSEKGELKNLEAKWLYSSNECSNNTGSKNTESLKLGSFWVLYAFSGITSTICVLFSIMPSLSLSNMSIWIRAIQLAKYIYSRKLNMESEARQDVPAIIMLPSPPTLEIQMENPPYR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0118 375 Gene3D - 48 184 - -
Sto2g0118 375 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 351 - -
Sto2g0118 375 SUPERFAMILY Periplasmic binding protein-like II 6 276 - -
Sto2g0118 375 Pfam Ligand-gated ion channel 275 304 IPR001320 GO:0015276|GO:0016020
Sto2g0118 375 Pfam Bacterial extracellular solute-binding proteins, family 3 7 274 IPR001638 -
Sto2g0118 375 SMART GluR_14 1 276 IPR001320 GO:0015276|GO:0016020
Sto2g0118 375 Gene3D - 4 47 - -
Sto2g0118 375 PANTHER GLUTAMATE RECEPTOR 3.4 7 351 - -
Sto2g0118 375 Gene3D - 214 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0118 Sto-Chr2 1033285 1034735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0118 8 313 Ion Channels AT2G29120 41.503 9.59e-72 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0118 - - gmx:100818619 504.982