Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0106 ATGGGAGCACCAAAGAGCCTAAAaaagtcatcatcatcatcatcatcaagagGCCACCAAAGGTTCGTGGGCGTTCGTCAAAGGCCATCAGGCAGATGGGTGGCTGAGATCAAAGACTCCGTCCACAAGCTCAGGCTATGGCTCGGAACCTTCGACACACCCGAAGACGCAGCACGTGCCTACGACACCGCCGCACGTGCACTCCGTGGCCCCAATGCTCGCACCAACTTCGATTTGCCCAACTCCGCCGCACCCTCCGGTGGTGTTGGCGGCGGTCACAGCTACGTGCCGGAGAACACGGAGCCCTTCTCGTTCGAGGACACGTGTGATGGGACGGAGGAAGGACTAGTTGGTGTACTCAAAGCCAAACTCAAATACTTTGAGAATCATCATCAAAAGGAAGGATTGAATTTGAATCTCAAGTCAATTCCCTCTCAATCTAGCTTTTCAGAttttagtaataataataattatggtaTTGGTGATAAAACTAGTGTGATTATCTCGGATGATCATGATGATGGAGGTGCTAGAGAGATCTTGAATAATAATGATGCTACGTGGCCACTTTGTGCTATGTATTCATCACGTGGGGATTTGGAGGAGAAGAATTCAGATAAAGTTGGAGAATATTCTATTTGTGGACTTGATCATCAAAATACAATGAATTCAGATCATAATGGGCCTGCAAGTAGCAATAGTAGTAGTATGCAATTGGGTCAAATTGATGGACTTGAAGCTTACCAACCATTTATTCAGTGCCAGAATAATGTTGTGAATATTCTTCTCAAGAAATCACTTCAAGAGGGAATGAACAATTTGGTTTTCATCACATATAGATTAACTACTTCTACCATTTTCTTAGCACCAATCGGCTACTTTTGGGAAAGAAATGGCAGACCAAGGCTCACATTTCGAATTTTGTGTTACTTATTCTTCAGTGCTATTGTTGGGGCATCAGTCACACAGTATTTCTTCCTTCTGGGAATCCAATACACCTCTGCTACCTTTGCCTGTGCCTTTGTCAATATGGTGCCCGTCATCACATTTATTATGGCATTGCCATTTGgGTTAGAAAGAGTGAACATAAAGTGCAAGAGTGGGATAGCAAAGATAGTAGGCACAGTGGTGTGCATTGGAGGAGCATTGATATTGACACTTTACAAAGGAAAGGCTTTATTTAGTTATAATAACTCTCATCATCATGATATGCATGCAGCTCAAATATGGAAGACTGGTTCAAGAGTGAAGTTTGGTTCTCCTATAAATATACAGAAATGGAGCATCGGAGTAATAGCTCTGATTCTGGGGACTCTGTTTTGGTCATCTTGGTTTCTTTTGCAATCAAACATAGGCAAAAGGTACCCTTGTCAGTATTCCAGCACTGCCATAATGACCTTCTTTGGAGCCATTCAATCAGCCATTATTGCCTTTGCCACTGGAAACAACATGTCTATGTGGCTCCTAAAAGGAAAGATGCAAATCATCACTGTTCTGTATTCTGGGATGGTTGGATCAGGGTTGTGCTTTGTGGGAATGTCATGGTGTGTGAAGAAAAGGGGAGCTGTGTTCACTGCTGCGTTTAGCCCTCTTGTTCAGGTAATGGCAGCCATGATTGATATCCCTCTCTTGCATGAGCAGCTCCATCTTGGAAGtgtTTTGGGATCCATATTGGTGATGGTGGGATTATACATTGTTTTGTGGGGTAAGAAGAAGGAGATGCAGAATAGGATGATGAAGCTAGCCCAACAACCTCAACAAATCaaggaacaacaacaacaacaaatcaTCAAAGTCTCATGTGATTCACGCTGTACTTGA 1821 0.4179 MGAPKSLKKSSSSSSSRGHQRFVGVRQRPSGRWVAEIKDSVHKLRLWLGTFDTPEDAARAYDTAARALRGPNARTNFDLPNSAAPSGGVGGGHSYVPENTEPFSFEDTCDGTEEGLVGVLKAKLKYFENHHQKEGLNLNLKSIPSQSSFSDFSNNNNYGIGDKTSVIISDDHDDGGAREILNNNDATWPLCAMYSSRGDLEEKNSDKVGEYSICGLDHQNTMNSDHNGPASSNSSSMQLGQIDGLEAYQPFIQCQNNVVNILLKKSLQEGMNNLVFITYRLTTSTIFLAPIGYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLERVNIKCKSGIAKIVGTVVCIGGALILTLYKGKALFSYNNSHHHDMHAAQIWKTGSRVKFGSPINIQKWSIGVIALILGTLFWSSWFLLQSNIGKRYPCQYSSTAIMTFFGAIQSAIIAFATGNNMSMWLLKGKMQIITVLYSGMVGSGLCFVGMSWCVKKRGAVFTAAFSPLVQVMAAMIDIPLLHEQLHLGSVLGSILVMVGLYIVLWGKKKEMQNRMMKLAQQPQQIKEQQQQQIIKVSCDSRCT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0106 606 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Sto2g0106 606 PANTHER WAT1-RELATED PROTEIN 252 589 - -
Sto2g0106 606 MobiDBLite consensus disorder prediction 72 101 - -
Sto2g0106 606 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Sto2g0106 606 SUPERFAMILY Multidrug resistance efflux transporter EmrE 491 572 - -
Sto2g0106 606 MobiDBLite consensus disorder prediction 1 28 - -
Sto2g0106 606 PANTHER WAT1-RELATED PROTEIN 252 589 IPR030184 GO:0016021|GO:0022857
Sto2g0106 606 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Sto2g0106 606 SUPERFAMILY Multidrug resistance efflux transporter EmrE 279 388 - -
Sto2g0106 606 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Sto2g0106 606 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Sto2g0106 606 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Sto2g0106 606 MobiDBLite consensus disorder prediction 1 21 - -
Sto2g0106 606 Pfam EamA-like transporter family 429 567 IPR000620 GO:0016020|GO:0016021
Sto2g0106 606 Pfam EamA-like transporter family 261 383 IPR000620 GO:0016020|GO:0016021
Sto2g0106 606 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Sto2g0106 606 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0106 Sto-Chr2 912271 919766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0106 257 501 Nodulin-like Gene Family AT3G30340 49.796 4.28e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto2g0106 EamA 2.5e-14 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0106 - - gmx:100803670 497.664