Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0105 ATGGGTTCACTTGATGAAATCAACCCAGCAAGTGAAATGTTCCAAGCTCAAGCCAACTTGTACAAAACCATTTATGGCTACCTCAATGGCATGGTTCTCAAATGTGCCGTTGAGTTAAGCATCCCAGACATAATCCACAACCATGCCCAACCCATCACAATTCCCAAATTAGCCTCCATTCTCCAAATCCACCCCACCAAAACTGCCTACGTGGACAGGATGGTCCACTTGCTCCTCCACAACGGCTTCTTAGCCAAAACCAAAGTAGGCAACGAGGAAGCATTCACACTCACCGCTTCTTCCAAGTTACTCCTGAAAGGGAACGAGCCATGCCTAGCCCCAATGGTCACGGGTTTCATAGCCACCTCCATGATCGAACCATTCGACATGTTGGACAAGTGGTTCAAAGGCGAGGAGAAGACAGTGACGGAGACGGTGTTCGGAGTGGGGTGGTGGGATGTGCTTGAACGGGACAGTGGCTACATGAAGGCGTTCAACGAGGCGATGGCTAGTGATTCGAGGATGGTGAATATGGCGCTCAGGAAATGTGAGTGGGCTTTCGAGGGGCTGGATTCGGTGGTGGATGTGGGCGGCGGGACGGGGACCACCGCGAGGGTGATCGCGGAGGCCTATCCCGATCTGGAATGCGTTGTGTTTGATCTGCCTCAAGTTGTGCAGGGTTTGTGTGGACACAAGAATTTGAGCTTTGTTGGTGGTAGCATGTTTGAATCTATTCCTTCTGCTCATGCTGTTCTTCTCAagTGGGTTTGCCATAATTGGGACGATGAAAGTTGCATAAAGATACTGGAGAAAAGTAGGGAAGCAATCTCAGGGAAGAAGGGAGGAAAGGTAATGATAATAGATGCAGTGATTAATGAGGAGAAAGATGGGCATGCAATGACAGAAGTGAAGCTGCTTTATGACGTTTTAATGTTGGCTGTTAATGGAAAAGAGAGAAATGAGAAACAGTGGGAGACACTTCTTCTTGCCGCCGGTTTCAAACGTCACAAAATTACTCCTTTCTTTGGCTTTAGGTCAATTATTGAAGCTTTTCCTTACTAA 1062 0.4783 MGSLDEINPASEMFQAQANLYKTIYGYLNGMVLKCAVELSIPDIIHNHAQPITIPKLASILQIHPTKTAYVDRMVHLLLHNGFLAKTKVGNEEAFTLTASSKLLLKGNEPCLAPMVTGFIATSMIEPFDMLDKWFKGEEKTVTETVFGVGWWDVLERDSGYMKAFNEAMASDSRMVNMALRKCEWAFEGLDSVVDVGGGTGTTARVIAEAYPDLECVVFDLPQVVQGLCGHKNLSFVGGSMFESIPSAHAVLLKWVCHNWDDESCIKILEKSREAISGKKGGKVMIIDAVINEEKDGHAMTEVKLLYDVLMLAVNGKERNEKQWETLLLAAGFKRHKITPFFGFRSIIEAFPY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0105 353 CDD AdoMet_MTases 193 291 - -
Sto2g0105 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 352 IPR016461 GO:0008168
Sto2g0105 353 PANTHER O-METHYLTRANSFERASE 9 351 IPR016461 GO:0008168
Sto2g0105 353 Gene3D Vaccinia Virus protein VP39 105 352 IPR029063 -
Sto2g0105 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 9 351 - -
Sto2g0105 353 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Sto2g0105 353 Gene3D - 4 104 IPR036388 -
Sto2g0105 353 PIRSF O-mtase 3 353 IPR016461 GO:0008168
Sto2g0105 353 Pfam O-methyltransferase domain 131 334 IPR001077 GO:0008171
Sto2g0105 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Sto2g0105 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0105 Sto-Chr2 905879 907384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0105 31 351 Monolignol Biosynthesis Gene Families AT5G54160 30.240 6.86e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0105 K22588 K13262 gmx:100813225 372.474