Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0101 ATGGCGGACGCCTTCGTTCCTTTCAAACCCAAGAGCAAGGACAACGCCAATCTCTTACTCGGCCGTTTCGAAATCGGGAAACTCCTCGGCCACGGAACCTTCGCGAAGGTCTACTCCGCTCGCAACATCAAAACCGATGAAGTCGTCGCCATCAAGATCATCGACAAAGAGAAAATCCTCAAAGGAGGCCTCGTCGCTCACATCAAGCGCGAGATCTCCATTCTCCGCCGCGTCCGCCACCCGAACATCGTACAGCTCTTCGAGGTCATGGCCACCAAGGCCAAGATCTACTTCGTCATGGAATACGTCCGAGGCGGCGAGTTATTCAACAAAGTCGCCAAAGGACGATTGAAGGAAGAAATCGCCAGGAAGTATTTCCAGCAATTGATCTCCGCCGTCGGATTCTGTCACGCCCGAGGCGTCTACCATCGAGATCTCAAGCCCGAAAACTTGCTCTTAGACGACAATGGCGATCTCAAGGTCTCCGACTTCGGACTCAGCGCCGTCTCCGATCAAATCCGTCAAGACGGCTTGTTCCACACCTTTTGCGGCACTCCAGCTTACGTCGCCCCTGAGGTTCTAGCTCGAAAGGGCTACGACGGAGCCAAGGTCGATCTCTGGTCTTgcggtgtcgttttgttcgtatTAGTGGCAGGATACCTGCCGTTTCACGACCAAAACGTGATGGCTATGTATAAGAAGATTTACAGAGGCGTATTCAGGTGTCCGAAGTGGTTTTCCCCTGATTTAAACCGCTTATGTACTCGTCTTCTTGACACAAATCCAGAAACCAGAATCGCTATTCCTGAAATTATGGAGAACAAGTGGTTCAAAAAAGGATTCAAGCAAATTAAATTCTATTTCGACGACGATAAGCTCTGTACTAATTTCGACGACAAGCtggattttcaaaataaagatgAGATAGAATCAATGACGGATTACACAATTGCAGAATCAGATTCAGAGGTAGAGAGTAGGAGAAGGCACAGTACTTCATTGCCGAGACCTGCGAGTTTAAACGCGTTTGACATAATATCATTCTCTCCTGGATTCGATCTTTCCGGATTGTTCGAGGAGAAAGGAGACCAGGCTAGGTTTGTCTCGGGAGCTCCGGTGTCGAAGATTATATCGACATTGGAGGAGATTGCTCAGTTAGTTAGCTTTACTGTGAGGAGGAAGGATTGTAGAGTGAGCTTGGAAGGTTCGAGAGAAGGCGTGAAAGGGCCATTGACGATTGCTGCGGAGATATTTGAATTGACGCCGTCGTTGATGGTGGTGGAggtgaagaagaaaggaggagaTCAAGCAGAGTATGAGGAATTCTGTAACGCTGAATTGAAACCTGGATTGCAGAAGTTGACGATGGAGGAATATGCCACTTCTTCAGCTAATTCGTCTTCTCAAGCTTTGGATTTACCACCATTGGAGTCTGATTCTGAATTTCAACGACCTAGCCTCCTATGCTTTCTACTTCGTAGTGTGGGTTCTCAGAAGAACCAAACTGGTCCCGTAAAAGAAACCTTAAATTTTGGTCTTGCTGGCCATGACTTCGTGGAGGTGGACGATGTTCGGGTGCCTGACGAGTCTCATGACGGAGATCTCGCGCTTGATTTGATCGATCAAGCCGATGCGGAGAATCTTCTCTTTGTTGATGACTTTAATGGCGACGCTCTCGTTGGTGGCGAGGTTTCGGGCGTGGTAGACTTTGGCGAATGTGCCTTGGCCCAGTAA 1734 0.4706 MADAFVPFKPKSKDNANLLLGRFEIGKLLGHGTFAKVYSARNIKTDEVVAIKIIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAKGRLKEEIARKYFQQLISAVGFCHARGVYHRDLKPENLLLDDNGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLVAGYLPFHDQNVMAMYKKIYRGVFRCPKWFSPDLNRLCTRLLDTNPETRIAIPEIMENKWFKKGFKQIKFYFDDDKLCTNFDDKLDFQNKDEIESMTDYTIAESDSEVESRRRHSTSLPRPASLNAFDIISFSPGFDLSGLFEEKGDQARFVSGAPVSKIISTLEEIAQLVSFTVRRKDCRVSLEGSREGVKGPLTIAAEIFELTPSLMVVEVKKKGGDQAEYEEFCNAELKPGLQKLTMEEYATSSANSSSQALDLPPLESDSEFQRPSLLCFLLRSVGSQKNQTGPVKETLNFGLAGHDFVEVDDVRVPDESHDGDLALDLIDQADAENLLFVDDFNGDALVGGEVSGVVDFGECALAQ 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0101 577 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0101 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Sto2g0101 577 Pfam NAF domain 337 392 IPR004041 GO:0007165
Sto2g0101 577 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0101 577 CDD STKc_SnRK3 22 276 - -
Sto2g0101 577 ProSiteProfiles NAF domain profile. 335 359 IPR018451 GO:0007165
Sto2g0101 577 PANTHER - 11 462 - -
Sto2g0101 577 CDD CIPK_C 341 452 - -
Sto2g0101 577 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Sto2g0101 577 Gene3D Kinase associated domain 1, KA1 336 456 - -
Sto2g0101 577 Gene3D Transferase(Phosphotransferase) domain 1 13 335 - -
Sto2g0101 577 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 462 - -
Sto2g0101 577 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0101 577 SUPERFAMILY Protein kinase-like (PK-like) 19 278 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0101 Sto-Chr2 846826 853841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0101 10 458 CBL-interacting serine-threonine protein kinases AT4G18700 79.556 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto2g0101 Pkinase 1.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0101 - - gmx:100790133 781.171