Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0098 ATGTCATCAGAAGAATTAGATCATGAAGAAGGTTCATTGGGATCAGGAGGTTCCCAGAAATATTGCTCAATATCCTTTGACTTGAATGAAGAAGCCAGTAGTGATGATGATCAACAAGACAAGAAAGATGAAATTAGAGAGAAAGATGAGGAAGATAATGAAGTtgaagttgaagaagaagaagaggaggaaaatTCATCATCAAATTCAAGAGATAATAatgaagaagcaaaagaaaTAATGAGAAGTGGGAGATCAGTGAGACAGTATGTGAGATCCAAGATGCCTCGCCTTCGTTGGACTCCAGATCTTCATCTCTCCTTTGTCCATGCAGTTAAAAGACTTGGTGGTCAAGAGAGAGCAACACCCAAATTGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCagATGTACAGAAGCAAGAAACTTGATGAGGCTGGGCAAGTGATAAATCAAAAGTACAGATCCTCCCACCTTGCTCGAATTTGTGAGGCATCTTCTTATCCATTTATGAATAATAATCCACAATTGAAGATGGGAAATGGTGGAATTATTCTAGAAAGCAATTACAACCAGCATACTAATAGTGCTGTTCAAGGTCTCTTCAGGCCATCTTTCACCCTATCACACTCTCATATAACGCCTACAGATTCAATTAGGCAGCAAGAGTGGTTCTTGAATTATAAGCAGCCCTATCCCTATAGAAGGCAAAGTTCCATAATAAGCAATGAAGTGGTGATGCCCTCCACACTTACTTCAACCCAACTTCTACGAAATGACCATACAACCACCCGAATTGCACCCATAAGACCTTCCCAATTTCTTGAAGAGAAAAAATGGCCTCCATTACACATTATTAGTAGTAATCCCCAATACAAGCACTTCACCAACTACTTACCTTcttctactactactactaataCAAGCATCCAGGGACAGCTTTCCAATAATACTACTTTCAAGCTACAATTTGAGCCCTCATTTAGAATAAAGtTAAATGAAGAGAAAGGAGTGAAGAAAGACGAAGAAGAATGGTTGCCTGATTTGCGATTGGGATTGAATTATTGTGAGAGAGATGACAACATAATTGATAATAAGGATGCAGGTGGAATGAATTCTTTATCGAAACTAAAGGCAGAGCACGCCAAAGCCAGGACTCGGAAGGTGATTTTGGCAATGGAGGGTGAAGAGGAGATGGACCAGAATCAACTCCACCATTACCTGAATTTCCAGCTACTACAATTTTTTAAGTTCTTGGGATCTGATAGTATCTATGTACAATGTCTTTTCAACCGTGGGGCTTTTTCTGATTTCTTGGGAGCGCACTTCCTGAATGCTTCCATGGCCTTTGTTCTGGAATTTGAATTTATAGGCTTGACTAATCTCGGCTTCTTTAGAGTCACTGAACAACCTCGCTCCACGAGCCGGGCTATAAGATCGGATTTGAGAGATTTTGCTTGGTTTCGAAACCTCATTGCAGGCAAGAAGCGGCTCATCATGAAGTCTCGAGTTTGTGGGTCTGTAGAGAAGGGGGAAGCCTTGGACATGGAGCTTCTGAAGCCTCTTTGGGATGTTGAGGAGGTTCAGATCCACCATTTCCCTTTCGTTTTCCTGGGATATGCTCCCAATTGA 1659 0.3966 MSSEELDHEEGSLGSGGSQKYCSISFDLNEEASSDDDQQDKKDEIREKDEEDNEVEVEEEEEEENSSSNSRDNNEEAKEIMRSGRSVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVINQKYRSSHLARICEASSYPFMNNNPQLKMGNGGIILESNYNQHTNSAVQGLFRPSFTLSHSHITPTDSIRQQEWFLNYKQPYPYRRQSSIISNEVVMPSTLTSTQLLRNDHTTTRIAPIRPSQFLEEKKWPPLHIISSNPQYKHFTNYLPSSTTTTNTSIQGQLSNNTTFKLQFEPSFRIKLNEEKGVKKDEEEWLPDLRLGLNYCERDDNIIDNKDAGGMNSLSKLKAEHAKARTRKVILAMEGEEEMDQNQLHHYLNFQLLQFFKFLGSDSIYVQCLFNRGAFSDFLGAHFLNASMAFVLEFEFIGLTNLGFFRVTEQPRSTSRAIRSDLRDFAWFRNLIAGKKRLIMKSRVCGSVEKGEALDMELLKPLWDVEEVQIHHFPFVFLGYAPN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0098 552 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 312 - -
Sto2g0098 552 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 324 364 - -
Sto2g0098 552 SUPERFAMILY Homeodomain-like 94 150 IPR009057 -
Sto2g0098 552 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Sto2g0098 552 Coils Coil 41 65 - -
Sto2g0098 552 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 312 IPR044848 GO:0003700
Sto2g0098 552 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 324 364 IPR044848 GO:0003700
Sto2g0098 552 MobiDBLite consensus disorder prediction 67 82 - -
Sto2g0098 552 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Sto2g0098 552 Gene3D - 95 152 - -
Sto2g0098 552 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Sto2g0098 552 MobiDBLite consensus disorder prediction 49 66 - -
Sto2g0098 552 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0098 Sto-Chr2 808788 819078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0098 86 157 G2-like Transcription Factor Family AT2G42660 77.778 3.21e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto2g0098 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0098 - - gmx:100808625 280.026