Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0090 ATGGCAGAGTTGCAGGAATCTCTCACGCCGCCGTCGGCAAATCACCGTCCGATGCCGGTCCGGGAAGATTGTTGGAGCGAGGAAGCTACCTCCACCCTTGTCGACGCCTGGGGACGCCGTTTCCTGGAGCTGAACAAAGGGAATCTCCGGCAGAAGGATTGGCAGGATGTGGCGGATGCCGTCAACGCTCTCCATGGCCTCACGAAGAAAACGCACCGTACGGATGTCCAGTGCAAGAACCGCATTGATACTATTAAGAAGAAGTATAAGGTTGAGAAGTCTAGGGTTTTGAACTCCAATGGGGCTTTTAGTTCCTCTTGGCCGTTTTTTGATAGGTTAGATTCTTTGATTGGATCCACTTTTAATGCGAAAAAATCGTCTCCGTCGCCTCCAGTGGCTCTTCCGTTGCCGTATCGTAAAACCCAGTCCCCGTTGACTGCTGTACCAGCAAGTGTGGCACTGCCACAGAAGCGATCAGCAGCGATGGGTTTAGATGATGGGTATTTTAGGAGGAATTACTCGGCTGTGGCAGCTGCAGCAGCTGCAGCGGAGGCTGATGAGGATGAGGACGAAGTGGAGGAAGAggatgaggaagatgaagagaggGGAAGTGAAGTTGAGGAGGGGGAGAGGGAAAAGGAAGGGATGAGGAGGTTGGCAAAGGCCATAGAGAGATTTGGGGAAATGTATGAGAGGGTGGAGAGAGAAAAGCTGCGGCAGATGGTGGATTTGGAGAAACAAAGGATGCAGTTTACTAAAGATCTGGAAGTACAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTGGAGAGGATTAAACGAGGGAAAAGATCTGGGTCTAATGTAATGAAATCTGACGATGGTGGATTCTGGAAGATTGGGAAATTgttcaggaagaagaaggagaaggaccGAGACTGCGGGAGAAGCGTCAATGGCGGCGGATTCGACGTGTTCAAGATCGGCCTTGAACACATGGGCCTCGGGCGTCTCCTTCCAGTCGATGCGGGTGTTGGCGATGGCCGCGGTCTCCGAGGCGAAGTCGGAGCACGGGCCGGGGACGACGGCCCTAGAAGGGAAGTCGTGGAAGGGGTCCCATAG 1104 0.5072 MAELQESLTPPSANHRPMPVREDCWSEEATSTLVDAWGRRFLELNKGNLRQKDWQDVADAVNALHGLTKKTHRTDVQCKNRIDTIKKKYKVEKSRVLNSNGAFSSSWPFFDRLDSLIGSTFNAKKSSPSPPVALPLPYRKTQSPLTAVPASVALPQKRSAAMGLDDGYFRRNYSAVAAAAAAAEADEDEDEVEEEDEEDEERGSEVEEGEREKEGMRRLAKAIERFGEMYERVEREKLRQMVDLEKQRMQFTKDLEVQRMQMFMDTQVQLERIKRGKRSGSNVMKSDDGGFWKIGKLFRKKKEKDRDCGRSVNGGGFDVFKIGLEHMGLGRLLPVDAGVGDGRGLRGEVGARAGDDGPRREVVEGVP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0090 367 Coils Coil 178 202 - -
Sto2g0090 367 PANTHER OS05G0560600 PROTEIN 7 282 - -
Sto2g0090 367 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Sto2g0090 367 Coils Coil 216 236 - -
Sto2g0090 367 MobiDBLite consensus disorder prediction 348 367 - -
Sto2g0090 367 Gene3D - 25 91 - -
Sto2g0090 367 MobiDBLite consensus disorder prediction 183 205 - -
Sto2g0090 367 MobiDBLite consensus disorder prediction 1 21 - -
Sto2g0090 367 MobiDBLite consensus disorder prediction 180 216 - -
Sto2g0090 367 MobiDBLite consensus disorder prediction 347 367 - -
Sto2g0090 367 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 282 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0090 Sto-Chr2 749806 752189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0090 21 282 Trihelix Transcription Factor Family AT3G14180 31.765 6.45e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto2g0090 Myb_DNA-bind_4 9.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0090 - - gmx:100785349 380.948