Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0059 ATGGGGGGTTTGATCGATCTGAACACTACGGAGGACGATGAAACGCTCTCTTCTGCttcctctgcttcttcttcgCCCTCTCACTCTTCAGCTTCCGCTATTGCTCCTTCTTCGTCTGTGTGCTTGGAGCTATGGCACGCCTGTGCGGGTCCAATGATCTCGTTGCCCAAGAAAGGAAGCGTGGTGGTCTATTTCCCACAGGGCCACTTTGAAGAGCAGCTTCCGGATTTTCCGGTCGCTGCCTTTAATATTAGCATCCCACCTCATGTATTCTGTCGCGTTGTAGATGTCAAGCTCCATGCGGAGGAAAGGAGCGATGAAGTGTATTGTCAGGTCTTGTTGGATCCAGAGAGTGAGCTAGTGGAACGAAAACTGCCTGAAGGAGAACCTGATGCTGATGGTGAAGAGGATACCGATGCTGTGGTGAAGTCCACAACACCCCACATGTTTTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGTCGAGCTGCTGAAGATTGCTTTCCTCCCCTGGACTACGATCAACAGAGACCTTCACAGGAGCTTGTGGCAAAGGATCTACATGGACTGGAATGGAGGTTCCGACATATTTACCGGGGTCAACCAAGGAGGCATTTGCTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGCTGTTTCTTAGGGGTGAGGATGGAGAACTGAGATTGGGAATCCGTAGGGCTGCTCAATTGAAAACTGGTGGTACCTTTCCAGTGCCCCCCACCCAGCAGTTGAATCCAAGCACGCTGATGGCTGTTGTTAATGCTTTAACTACAAAATCTGCCTTTAATGTATTCTATAATCCCAGGTGCACTGGATTGATTGTTGGAATGAGTGATGTGGATCCTATAAAGTGGCCTGGATCAAAATGGAGATGCCTTCTGGTAAGGTGGGATGACATAGAAGGTACTAGGCATAATAGGGTTTCCCCTTGGGAAATTGAGCCATCTAGTTCTGGTTCCACTTCGAATAACTTGATGGCAACTAGTTCGAAGAGGAACAGGATTGGGTTGCCTTCTGAAAAGCATGAATTTCCAATCTCTGATGGGATTGGAGCAGTGGACTTTGGGGAATCATTAACGTTCCGAAAGGTCTTGCAAGGTCAAGAAATATTGGGCATCAGTACCCCTTATGGAGGTAGTAATGCTCAGAGTTACCATTTCTCTGAAACAAGGAGGTGTTATCCTGTTTCAAACTGTTCTGGGGTTGTTGCAACAGGAACTAGTGTCAGAGTTCCACATGTAAGTTCTGACATTTCCAGCCGTGGCATAGGCTTTAGTGAATCTTTTCAATTCCAAAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCGTATGGAAGAACCTTATCTATTGATGGGTCTCGTAGAAATGGTTGCTTTAGAGGTTTTGATGGTTGCCAATTGCTGGGCACCAGAAGTGGAAGTTCTTCCCAGATGCAGGACAATTCTGCACATTTGCTTCCATCAGGGAAAGTTTCATCTCCATCATCTGTTTTGATGTTCCAGCAAGCAGTCAATCATGTTCCTAACTTTGTTTACGGTAACAAAAGTAATCAAGAGAAGGAGGAAAAAATCCACTACCAAGGTTCATATGCTTCCGAAGTTAAAGGTATAAAATTTGCGTTATCTTCATCTCATAAGCCTACTTTCTATGGGAAAGTTCAGGAACGAATAAATTCTTTTGGTTTGTCAAATTTGCCTAATCAACTAGTCACCACTTGTTCAGATAATTCTCTTTCGCCACTGAGAGGTGGTCAAGAGTTGGTTTCCTCGTGTAAAAGTAGCTGCAGACTCTTTGGGTTTTCATTAATCGAAGAAaatcctactccccaaaaagaAGCAGGTCAATTAAATTCTGAACCAGGAACAAGGCAGCTAGAAGCAACTGTACCAAAGGTGTGGTGCAGTATTGACTGA 1992 0.4438 MGGLIDLNTTEDDETLSSASSASSSPSHSSASAIAPSSSVCLELWHACAGPMISLPKKGSVVVYFPQGHFEEQLPDFPVAAFNISIPPHVFCRVVDVKLHAEERSDEVYCQVLLDPESELVERKLPEGEPDADGEEDTDAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYDQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKTGGTFPVPPTQQLNPSTLMAVVNALTTKSAFNVFYNPRCTGLIVGMSDVDPIKWPGSKWRCLLVRWDDIEGTRHNRVSPWEIEPSSSGSTSNNLMATSSKRNRIGLPSEKHEFPISDGIGAVDFGESLTFRKVLQGQEILGISTPYGGSNAQSYHFSETRRCYPVSNCSGVVATGTSVRVPHVSSDISSRGIGFSESFQFQKVLQGQEILPSQPYGRTLSIDGSRRNGCFRGFDGCQLLGTRSGSSSQMQDNSAHLLPSGKVSSPSSVLMFQQAVNHVPNFVYGNKSNQEKEEKIHYQGSYASEVKGIKFALSSSHKPTFYGKVQERINSFGLSNLPNQLVTTCSDNSLSPLRGGQELVSSCKSSCRLFGFSLIEENPTPQKEAGQLNSEPGTRQLEATVPKVWCSID 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0059 663 MobiDBLite consensus disorder prediction 1 30 - -
Sto2g0059 663 SMART B3_2 150 252 IPR003340 GO:0003677
Sto2g0059 663 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Sto2g0059 663 PANTHER AUXIN RESPONSE FACTOR 31 294 - -
Sto2g0059 663 PANTHER AUXIN RESPONSE FACTOR 293 641 - -
Sto2g0059 663 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 31 294 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sto2g0059 663 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 293 641 IPR044835 GO:0003677|GO:0006355|GO:0009725
Sto2g0059 663 SUPERFAMILY DNA-binding pseudobarrel domain 142 257 IPR015300 -
Sto2g0059 663 Gene3D - 148 252 IPR015300 -
Sto2g0059 663 CDD B3_DNA 148 250 IPR003340 GO:0003677
Sto2g0059 663 Gene3D - 276 347 - -
Sto2g0059 663 MobiDBLite consensus disorder prediction 10 30 - -
Sto2g0059 663 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0059 Sto-Chr2 535157 541395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0059 37 639 B3 DNA Binding Superfamily AT5G60450 39.728 7.56e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Sto2g0059 B3 2.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0059 K14486 - gmx:100789906 845.884