Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0058 ATGAGGAGAAAAGGTGGAATATTTCATGAGTTTCCGGGACTGGGACTTCCAGCAGGAGTGAAATTCGATCCAAATGACCAAGAGATACTTGAACATTTAGAGGCAAAGGCTGTGTCTGATGTGCGTAAGCTTCATCCTCTTTTAGACGACTTCATTCCCACACTTGAAGGCCACAATGGAATCTGCTATACACACCCTCAAAAGCTACCAGGAGTTAGCAAAGATGGACAGATACGGCACTTCTTTCACAGGCCTTCAAAAGCATACACAACGGGGACAAGGAAGCGAAGAAAGGTTGACACGGACGAGGAAGGAAGCGAAACGAGATGGCACAAGACAGGGAAAACCAGAGCAGTTATAGTTGGTGGTGAAGTGAAAGGCTTCAAAAAGATACTAGTGCTCTACACTAACTATGGGAGGCAGAGGAAGCCAGAGAAGACCAATTGGGTAATGCATCAATACCATCTTGGCacaaatgaagaagagaaggatGGAGAGTTGGTGGTTTCAAAGGTTTTCTACCAGACACAACCTAGGCAATCTGCTAATTCAATTATTAACAGCAAGGAGGATCCATATGACAAAACAACGTCATTCACTAATATTGATGATGAAACTAGTACAATACCTAAAGAAGCAGGTCTTATGGAGTATTACAATAATCCTGGCTACGTAAGTTATGAGCATTTGGGTCATAATAATACAGAAACCTCGCCTCCTCAACTTATTCCAAACTTGGTTGTCCAAGATAGTCATGATCATGGCTCTTCTTTTATTCGTTTGGCAATGGATGCAAATAAACCAAGACATGACACAAAATAG 822 0.4124 MRRKGGIFHEFPGLGLPAGVKFDPNDQEILEHLEAKAVSDVRKLHPLLDDFIPTLEGHNGICYTHPQKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVDTDEEGSETRWHKTGKTRAVIVGGEVKGFKKILVLYTNYGRQRKPEKTNWVMHQYHLGTNEEEKDGELVVSKVFYQTQPRQSANSIINSKEDPYDKTTSFTNIDDETSTIPKEAGLMEYYNNPGYVSYEHLGHNNTETSPPQLIPNLVVQDSHDHGSSFIRLAMDANKPRHDTK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0058 273 Gene3D NAC domain 25 179 IPR036093 GO:0003677|GO:0006355
Sto2g0058 273 ProSiteProfiles NAC domain profile. 16 175 IPR003441 GO:0003677|GO:0006355
Sto2g0058 273 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 251 IPR044799 GO:0003700
Sto2g0058 273 SUPERFAMILY NAC domain 12 175 IPR036093 GO:0003677|GO:0006355
Sto2g0058 273 Pfam No apical meristem (NAM) protein 17 156 IPR003441 GO:0003677|GO:0006355
Sto2g0058 273 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 5 251 - -
Sto2g0058 273 MobiDBLite consensus disorder prediction 93 110 - -
Sto2g0058 273 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0058 Sto-Chr2 530310 534264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0058 16 267 NAC Transcription Factor Family AT1G28470 63.095 3.19e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto2g0058 NAM 3.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0058 - - gmx:100795920 391.349