Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0057 ATGAAGCAGAATATTGCAGAGGATGTTGGTTATTATTTGGCCATAATTAGTCTATCCATATCTCTCTTGGTTCttggtattgtcctgtttcttATTTGCAGGAAGAAGCCAGTTGAATCTGAAGAAACACTTGCTGTGAAGATGTGTGCTCGTGCATACCCATTAATGGACATTGATGCTGCGACTGATGGGTTCAACCATGGGAGAATCATGGCCAAAGATTGGTTGGGAACTTTATATGCTGGTGTCTTAGAAAAAGGCCAACTTGTAGCTGTCAAACGGATTCATCCCCTGCTTGTTCTAAGCAATGCTGGATTAGCTGGATTCTCATCACTTCTCAAATGCCTCTCTTTAGCTCAACACCCCAATATAGTTCCCATTATAGGCTTCTCAGAAGCCCCAGGTGAGAGAATCATAGTGATGGAGTTTGTGGGGATGGTGAGCTTAGACTTGTATCTGCATCAAAACCCAAATGGGAATTCACTCTTGGGTTGGAACCAGCGTTTCAGAATCGCAGCTGGAGCAGGCAGAGGACTTGAGTACCTGCATGAAGTGGTATCACCAAACATAGTCCATGGCTGTGTCAAGTCCTCAAACATCCTAATTGATGTGAGCTTCTGTGCTAGGATTTGTGATTATGGGCTTACCTTTCTTGCACCCCAAGAAAAGAAAGGCTTAAAAGGGTATGTGGATGATGAGTATTGGAATAATAATGGAATTACAAGGGGTGGTGGTGCTTGCAAAGAGAGTGATGTTTATGGGTTAGGAGTGGTATTGTTGGAGCTTTTGAGTGGAAGAAGAAGTGATGGAGGGTTATTAGTAAAGTGGGCATTGCCTTTGATTAAGGAAATGAGGTATAGTGAAGTATTGGACCCAAGATTGGTAATTCCTTCTGAGATGAAGCCTCTTGTTAGATTAGCCAAAGTTGCTTCAGCTTGTGTTGGAAATTCAAGGAAATGTAGGCCTTCCATTTCTCAAGTGGCTACCATCTTGAGTCATCTAGAGAGGGAAGTATGCTTATGA 1023 0.4194 MKQNIAEDVGYYLAIISLSISLLVLGIVLFLICRKKPVESEETLAVKMCARAYPLMDIDAATDGFNHGRIMAKDWLGTLYAGVLEKGQLVAVKRIHPLLVLSNAGLAGFSSLLKCLSLAQHPNIVPIIGFSEAPGERIIVMEFVGMVSLDLYLHQNPNGNSLLGWNQRFRIAAGAGRGLEYLHEVVSPNIVHGCVKSSNILIDVSFCARICDYGLTFLAPQEKKGLKGYVDDEYWNNNGITRGGGACKESDVYGLGVVLLELLSGRRSDGGLLVKWALPLIKEMRYSEVLDPRLVIPSEMKPLVRLAKVASACVGNSRKCRPSISQVATILSHLEREVCL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0057 340 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 6 339 - -
Sto2g0057 340 Pfam Protein tyrosine and serine/threonine kinase 77 330 IPR001245 GO:0004672|GO:0006468
Sto2g0057 340 Gene3D Phosphorylase Kinase; domain 1 31 143 - -
Sto2g0057 340 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 339 - -
Sto2g0057 340 ProSiteProfiles Protein kinase domain profile. 65 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0057 340 SUPERFAMILY Protein kinase-like (PK-like) 43 331 IPR011009 -
Sto2g0057 340 Gene3D Transferase(Phosphotransferase) domain 1 146 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0057 Sto-Chr2 522641 524229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0057 42 331 Receptor kinase-like Gene Family AT3G59420 37.459 1.24e-50 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto2g0057 PK_Tyr_Ser-Thr 2.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0057 - - var:108342329 484.182