Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0056 ATGTCCATTcctctcttccttctcttcctcttctccctcctccCCTTCACTCTCTCCCTCAACCAAGACGGCCTCTACCTCTACCACTTCAAGCTCTCTCTCGACGACCCCGACTCCTCCCTCTCCTCCTGGAACCCCCGTCACCTCACCCCCTGCTCTTGGGCCGGCGTCTCCTGCGACTCCTCCAACACCTCCGTCACCCACCTCGACCTCTCCAACACCAACATCGCCGGCCCCTTCTCCGCCTCCCTCCTCTGCCGCCTCCCCAACCTCTCCTTCATCTCCCTCTTCAACAACTCCATTAACCACACCCTTCCTCTCGATATCTCCTCTTGTCACTCCCTCATCCACCTCGACCTCTCCCAGAATCTCCTTACTGGTTCACTCCCCCACACTCTCTCCCTCCTCCCCAACCTCAAATATCTCGACTTGACCGGAAACAATTTCTCCGGTCCCATTCCCGATTCCTTTggaagcttccagaagctcgaGGTTATCTCTCTGGTTTACAATCTTCTCGAAGGAACTATCCCTGCTTCTCTGGGTAATGTTACCACATTGAAGATGCTCAATCTCTCTTATAATCCCTTTTTCCCCGGGCGGATCCCGCCGGAGATCGGGAATCTCACGAACCTCGAGGTGCTGTGGCTGACGCAATGTAACTTAGTGGGCACGATTCCTGACTCGCTTGGCAACTTGAAGAAGCTAAAGGATTTGGACCTGGCGTTCAATAATTTGTACGGGTCTATCCCGAGTTCGCTCACTGAGTTGACGAGTGTGAACCAGATTGAGCTTTATAATAACTCGTTGTCCGGCGAGTTGCCTCGGGGGATGTCCAACCTCACCGCATTGAGGCTGCTCGACGCCTCTATGAACCACTTGACGGGGACGATTCCCGACGAGTTGTGTCGTTTGCCGTTGGAAAGTCTCAATCTTTATGAGAATCGTTTCGAGGGGGAGTTGCCGGAGAGCATAGCGAACTCTCCGAATCTCTATGAGTTGAGATTGTTCGGTAACCGACTCACCGGGAAGCTGCCGGCGAATCTCGGGAAGAATTCGCCTCTGAGGTGGCTTGACGTTTCGACCAACCAGTTCTGGGGTGGTATTCCGGCGAGTTTGTGTGACCATGGGCAGTTGGAGGAGCTTCTTATGATACACAACTTGTTCTCCGGCGAGATCCCGGCGAGTTTGGGGATGTGTCAGAGCTTGACGCGTGTGAGGCTCGGGTTCAACAGATTATCCGGCGAAGTTCCGGCGGGTATATGGGGGCTTCCACACGTGTATCTGCTGGAGCTTGTGGATAACTCGTTTTCGGGTTCAATCTCGAGAACTATAGCTGGGGCAGGGAATTTATCATTGTTGATTTTGTCGAAGAACAATTTCAGTGGAATGATTCCTGACGAGATTGGATGGTTGGAAAATCTTGAGGCATTTTCTGGGAGTGACAACAACTTCAGTGGCTCGCTTCCTGATAGTATTGTGAATCTTGGACAGCTTGGGACTCTTGATCTTCACAACAATAAACTCTCGGGTGAGCTTCCCAAAGGAATTCGAACTTGGAGGAAGCTCAATGAGTTGAATTTGGCAAACAATGAGATTCATGGGAAAATCCCCGATGAAATTGGGAGTTTATCCGTGCTTAATTTCCTCGATCTCTCCCAAAATCAACTTTACGGGAAAATCCCCCGTGGCTTGCAGAATTTGAAGCTAAATCAGCTCAATTTGTCCTACAATCGACTTTCAGGACAACTTCCATCTCTATTGGCTAAAAATATGTACAGGACTAGCTTTCTGGGGAATCCTGGTTTATGTGGGGATTTGAAAGGTCTATGTGATGGCAGAGATGAAGAGAAAACCGCTGGTTATGTTTGGCTGCTTCGAGCTATTTTCATCATTGCTACTTTGGTATTTGTTGTTGGTGTGGTCTGGTTCTATTTCAAGTACAGGAACTTCAAGAACGCAAGGAGAGCCATTGATAAGTCGAAATGGACTTTGATGTCGTTCCATAAACTGGGTTTCAGTGAAGACGAGATTTTGAACTgccttgatgatgataatgagatAGGAAGTGGATCCTCTGGGAAAGTTTACAAGGTTGTGCTAAGCAATGGGGAAGCCGTGGCAGTGAAGAAACTGTGGGGAGGCGTCGTGAAGGATGTAGAGAGCGGCGATTATGAAAAGGGTTATGTTCAAGACAATGCTTTTGATGCAGAGGTTGAGACTTTGGGAAAAATTAGACACAAAAATATAGTGAAGCTGTGGTGTTGCTGCACTACAAGGGACTGCAAGCTCTTGGTGTATGAGTACATGCCAAATGGTAGTCTTGGAGATTTGCTGCATAGTAGTAAAGGAGGATTATTGGATTGGCCGACGAGGTATAAGATTGCCGTCGATGCTGCCGAAGGCCTTTCTTATCTGCATCATGACTGTGTTCCTGCAATTGTTCATAGAGATGTGAAATCCAGCAATATCTTGTTGGATGGGGACTTTGGTGCAAGAGTAGCTGATTTCGGAGTAGCTAAGGTTGTCGAAACCACGGCCAAAGGAGCTAAATCCATGTCGGTCATAGCCGGCTCGTGTGGCTACATTGCACCAGAATATGCATACACATTGAGAGTGAACGAGAAGAGTGACATATACAGTTTTGGTGTGGTGATACTGGAGTTGGTTACCGGAAGGCGGCCGGTAGAGCCGGAATTTGGGGAAAAGGACTTGGTTAAGTGGGTGTGCACCACCTTGGATCAGAAGGGTGTGGATCATGTGGTTGATTCCAGACTTGATTCTTGTTTCAAAGAAGAGACTTGCAAGGTGCTCAACATTGGGCTCATGTGCACTTGCCCTCTTCCTATAAACCGCCCCGCCATGAGGAGAGTGGTGAAGATGTTGCAAGAAGTGGGCACAGACAATAATCAGACGAAGCCTGCAGCAAAGAAAAATGGGAAATTGTCACCTTATTACTATGATGATGGATCTGATCATGGAAGTGTAGCTTAG 2994 0.4736 MSIPLFLLFLFSLLPFTLSLNQDGLYLYHFKLSLDDPDSSLSSWNPRHLTPCSWAGVSCDSSNTSVTHLDLSNTNIAGPFSASLLCRLPNLSFISLFNNSINHTLPLDISSCHSLIHLDLSQNLLTGSLPHTLSLLPNLKYLDLTGNNFSGPIPDSFGSFQKLEVISLVYNLLEGTIPASLGNVTTLKMLNLSYNPFFPGRIPPEIGNLTNLEVLWLTQCNLVGTIPDSLGNLKKLKDLDLAFNNLYGSIPSSLTELTSVNQIELYNNSLSGELPRGMSNLTALRLLDASMNHLTGTIPDELCRLPLESLNLYENRFEGELPESIANSPNLYELRLFGNRLTGKLPANLGKNSPLRWLDVSTNQFWGGIPASLCDHGQLEELLMIHNLFSGEIPASLGMCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGSISRTIAGAGNLSLLILSKNNFSGMIPDEIGWLENLEAFSGSDNNFSGSLPDSIVNLGQLGTLDLHNNKLSGELPKGIRTWRKLNELNLANNEIHGKIPDEIGSLSVLNFLDLSQNQLYGKIPRGLQNLKLNQLNLSYNRLSGQLPSLLAKNMYRTSFLGNPGLCGDLKGLCDGRDEEKTAGYVWLLRAIFIIATLVFVVGVVWFYFKYRNFKNARRAIDKSKWTLMSFHKLGFSEDEILNCLDDDNEIGSGSSGKVYKVVLSNGEAVAVKKLWGGVVKDVESGDYEKGYVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPAIVHRDVKSSNILLDGDFGARVADFGVAKVVETTAKGAKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVEPEFGEKDLVKWVCTTLDQKGVDHVVDSRLDSCFKEETCKVLNIGLMCTCPLPINRPAMRRVVKMLQEVGTDNNQTKPAAKKNGKLSPYYYDDGSDHGSVA 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0056 997 ProSitePatterns TNF family signature. 18 34 IPR021184 -
Sto2g0056 997 MobiDBLite consensus disorder prediction 969 997 - -
Sto2g0056 997 Pfam Leucine Rich repeats (2 copies) 114 153 IPR025875 -
Sto2g0056 997 Gene3D Ribonuclease Inhibitor 20 176 IPR032675 -
Sto2g0056 997 Gene3D Ribonuclease Inhibitor 177 300 IPR032675 -
Sto2g0056 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Sto2g0056 997 Pfam Protein kinase domain 684 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0056 997 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 977 - -
Sto2g0056 997 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Sto2g0056 997 SUPERFAMILY L domain-like 369 605 - -
Sto2g0056 997 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Sto2g0056 997 SUPERFAMILY Protein kinase-like (PK-like) 677 963 IPR011009 -
Sto2g0056 997 ProSiteProfiles Protein kinase domain profile. 682 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0056 997 SMART serkin_6 682 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0056 997 Gene3D Ribonuclease Inhibitor 307 613 IPR032675 -
Sto2g0056 997 PANTHER LRR RECEPTOR-LIKE KINASE 7 977 - -
Sto2g0056 997 SMART LRR_typ_2 544 567 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 281 305 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 184 209 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 233 257 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 496 520 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 88 112 IPR003591 -
Sto2g0056 997 SMART LRR_typ_2 136 159 IPR003591 -
Sto2g0056 997 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515
Sto2g0056 997 Gene3D Phosphorylase Kinase; domain 1 666 769 - -
Sto2g0056 997 Gene3D Transferase(Phosphotransferase) domain 1 770 986 - -
Sto2g0056 997 SUPERFAMILY RNI-like 68 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0056 Sto-Chr2 517017 520124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0056 15 997 Receptor kinase-like Gene Family AT1G28440 71.862 0.0 1442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto2g0056 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0056 - - gmx:100819887 1660.2