Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0039 ATGGGGAATTTCTTACTCATCTATGACTACATGGAGAATGGGAGTCTAGACAAGAGAGTCTTCGAATGTGAGGAGTCGAAGATGCTCAACTTTGAAGAAAGATTAAGAATTCTGAGAAATGTGGCTTCTGGGATATTGTACTTGCATGAAGGGTGggaatccaaagtcctacatagGGACATCAAAGCTAGCAATGTGTTACTAGATAAGGACATGAACGGAAGGCTAGGAGATTTCGGATTAGCTCGTGTACATGATGAccatcatcaagtttcttgcaCTACTAAAGTGGTTGGAACATTGGGTTATATGGCTCCTGAAGTGATTAAGACTGGAAGAGCATCAACACAAACTGATGTTTACATGTTTGGAATCTTGATTTTGGAGGTAATGTGTGGGAGGAGACCTATAGAGGAAGGGAAGGCTTCTTTGGTGGAGTGGGTGTGGGAATTGATGGTAAAAGGACAAATAGTAAATGCAATTGATGTGAGAATGAGGGAGGAATTAGGAGGAATTATGAATGAGGAAGATGTGGAGAGAGTGCTTAATTTGGGTTTGTTGTGTGCATATCCTGAACCTAAAGCTAGGCCTAAAATGAGACAAGTAGTGAAAATTTTAGAGGGGAGGAATAATGAAGAGGATGGGGAGTATAATGAAAGTGAGGATATGCGTATCTATTTGTTGCAAAGGATGAAATCAAGTACTGATGAATGGTGTGATCAGTATTCTCATTATTTTAACTTTTCATCACACCCTACATTTGaagatattattaatccacACATTCATTCTTCCTCAATTTCTTTCACTTACACCGATTCCATAATTGATGGTAGGTAA 840 0.3655 MGNFLLIYDYMENGSLDKRVFECEESKMLNFEERLRILRNVASGILYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHDDHHQVSCTTKVVGTLGYMAPEVIKTGRASTQTDVYMFGILILEVMCGRRPIEEGKASLVEWVWELMVKGQIVNAIDVRMREELGGIMNEEDVERVLNLGLLCAYPEPKARPKMRQVVKILEGRNNEEDGEYNESEDMRIYLLQRMKSSTDEWCDQYSHYFNFSSHPTFEDIINPHIHSSSISFTYTDSIIDGR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0039 279 SMART serkin_6 2 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0039 279 Pfam Protein tyrosine and serine/threonine kinase 3 206 IPR001245 GO:0004672|GO:0006468
Sto2g0039 279 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0039 279 Gene3D Transferase(Phosphotransferase) domain 1 11 235 - -
Sto2g0039 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Sto2g0039 279 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 3 268 - -
Sto2g0039 279 PANTHER - 3 268 - -
Sto2g0039 279 SUPERFAMILY Protein kinase-like (PK-like) 3 208 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0039 Sto-Chr2 406279 407118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0039 1 158 Receptor kinase-like Gene Family AT4G04960 71.069 6.66e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto2g0039 Pkinase 7.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0039 - - gmx:100804391 376.326