Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0036 CTGTACTTCTTGGAAGAGGGGAACAGCACACCACCGCACCTACTATCCTACAGACGAGCGGCCGCCTCTGCACCGACAGACGACGACGGAACTCGTGAGGCAGTTCTTCCCTTGGTGTTTTCGCATCTTCCTATCGGTTTGGCCGATATAGTATCTCAATCCTTTGTTGTAGCTCATGAGGTTGGTCAAGTTAAGTGTGGGTCCTGTGCTGTACTCCTAATGTACCCATTTGGTGCTTCACAAGTTAGGTGTTCCTCTTGCTGCTTTGTGACAGAAATTGGGGAACAGAACAGCCGACCTCCATTGTCTGTACTACAGCAGGAACAGAACAGCCGACCTCCATTGTCTGTACTACAGCAAGGGAAAGCTACTCCTCCTCCCAGAACTGCTCCTTAG 396 0.5076 LYFLEEGNSTPPHLLSYRRAAASAPTDDDGTREAVLPLVFSHLPIGLADIVSQSFVVAHEVGQVKCGSCAVLLMYPFGASQVRCSSCCFVTEIGEQNSRPPLSVLQQEQNSRPPLSVLQQGKATPPPRTAP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0036 131 PANTHER PROTEIN LOL2 58 112 - -
Sto2g0036 131 Pfam LSD1 zinc finger 66 90 IPR005735 -
Sto2g0036 131 MobiDBLite consensus disorder prediction 100 131 - -
Sto2g0036 131 PANTHER PROTEIN LSD1 58 112 IPR040319 -
Sto2g0036 131 MobiDBLite consensus disorder prediction 100 118 - -
Sto2g0036 131 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 63 91 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Sto2g0036 zf-LSD1 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0036 - - ming:122093910 97.8265