Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0006 ATGAGGTTGCATGTGCGAATCTTTGTCATGTCGATGGTGATATTTTCAGGAACCTTTTGTACTGGGGAAACCGACCTGCTTGATGTTGCAGCGATCAATAGTTTATATGTTGCCCTGGGTTCACCCCCTCTTCAAGGATGGAAATCCATAGGAGGTGATCCATGCTTAGAATTGTGGCAAGGTGTGGATTGTGTCTTCACCAACATAACTCAATTACGACTTGGAGGCATGAATTTGGGAGGAGAACTGGGCAGTAATTTGAATTTCCCCTCCATTTTAGAAATAGATCTTAGCAACAATCACATTGGAGGGACTATTCCGCCCACTTTGCCTCCTACACTGAGGAATTTGTCTCTTTCAGCAAATCAGTTAACTGGAAGTATTCCAGATGCCCTATCCTCATTAACTCAATTGTCAGACTTGTCATTAAGCAATAACCTTCTCAATGGACAAGTCCCAGATGCATTTCAGCAGCTTACTGGTCTGATGAACATAGACCTCTCAGGTAACAAATTGAGTGGTCAGCTGCCCCCTTCATTAGGGAATTTATCATCGCTTACAACATTaCACTTGCAGAACAATCAACTTTCTGGGACTCTTAATGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATCTATTCTTTGGGCCAATTCCACCAAAATTGTTGAGTATCCCAAATTTCAGAAAAGATGGAAATCCATTTAATACTACCATCATTCCATCACCTCCAGCTGCAGCTCCTTTGCCTATGGCTCCATCCCTTCAAGAAGCACCTTGGAAAGTGGCAAATAGTCCATCTACCATGGAAGCGTCAATACCTGCAAATGCTAGGAATACAAAGTCTTTCATAGCTAAGAAGGTTATTTGGATTGCCATTGCAGGGATGATCATGTTTGTTACATTAGGagtttgtctttttcttttgtggTGCATTAAGAGAAGgcaaaagaatgaaaatgttaaGAAATATGACGAGGGAGCGTACGCAATACCTTTACGTAAAACTCAAAACAGTGATTCTGCTTTTGAAATAATTGGGAAACCTATACCATCACTTGGATATGGAGtacaaaatagaaaaacaaatatgattCCAAAGGTTCAGGATGAACAAGAAATGCCTGTTAAACGAGTATCTGCAGCCTCAACACTTCCAACACTACAGCCACCTCCACATCCTCTCCCAATGATTCCCGGTGAAAAGGTCTTCATCAAACCAGCAATACCTAACAAAGTAACTGAGAGACAAGTTATGACTAGTTCCTTGCAAGCTTATACCATTGCATTACTTCAGCAGTATACAAATAGTTTTTCCCAAgaaaattatattggggaagGCACGCTGGGTTCTGTTTATCGAGCTGAGGTCCCTGATGGGAAGTTGTCAGGACGTCTTCTTACTGCACATGGTTACAGTGCTCCAGAATTCGAGTCAGGAAGTTATACACAGCAAAGTGATGTCTTTAGTTTTGGAGTTGTATTGCTGGAACTCCTCACTGGAAGAAAATCGTTTGACAGGACACAGCTTCGCGGTGAACAATATCTTGTCAGATGGGCAGTTCCTCAACTCCATGACATTGATGCCTTGTCAAAAATGGTTGACCCATCTTTAAATGGAGCCTATTCTATGAAGTCCTTGTCTCGTTTTGCAGACATCATTTCTTCTTGTGTACAGCGCGAACCAGAGTTCCGGCCAGCAATGTCTGAAATTGTGCAGGATTTCTTAAGAATGATCTAG 1752 0.403 MRLHVRIFVMSMVIFSGTFCTGETDLLDVAAINSLYVALGSPPLQGWKSIGGDPCLELWQGVDCVFTNITQLRLGGMNLGGELGSNLNFPSILEIDLSNNHIGGTIPPTLPPTLRNLSLSANQLTGSIPDALSSLTQLSDLSLSNNLLNGQVPDAFQQLTGLMNIDLSGNKLSGQLPPSLGNLSSLTTLHLQNNQLSGTLNVLQDLPLQDLNIENNLFFGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAAAPLPMAPSLQEAPWKVANSPSTMEASIPANARNTKSFIAKKVIWIAIAGMIMFVTLGVCLFLLWCIKRRQKNENVKKYDEGAYAIPLRKTQNSDSAFEIIGKPIPSLGYGVQNRKTNMIPKVQDEQEMPVKRVSAASTLPTLQPPPHPLPMIPGEKVFIKPAIPNKVTERQVMTSSLQAYTIALLQQYTNSFSQENYIGEGTLGSVYRAEVPDGKLSGRLLTAHGYSAPEFESGSYTQQSDVFSFGVVLLELLTGRKSFDRTQLRGEQYLVRWAVPQLHDIDALSKMVDPSLNGAYSMKSLSRFADIISSCVQREPEFRPAMSEIVQDFLRMI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0006 583 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 465 583 - -
Sto2g0006 583 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 4 466 - -
Sto2g0006 583 PANTHER LEUCINE RICH REPEAT KINASE 2 4 466 - -
Sto2g0006 583 PANTHER LEUCINE RICH REPEAT KINASE 2 465 583 - -
Sto2g0006 583 SUPERFAMILY Protein kinase-like (PK-like) 474 577 IPR011009 -
Sto2g0006 583 SUPERFAMILY L domain-like 35 231 - -
Sto2g0006 583 SMART serkin_6 351 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto2g0006 583 Gene3D Phosphorylase Kinase; domain 1 407 467 - -
Sto2g0006 583 Gene3D Ribonuclease Inhibitor 28 249 IPR032675 -
Sto2g0006 583 ProSiteProfiles Leucine-rich repeat profile. 185 207 IPR001611 GO:0005515
Sto2g0006 583 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Sto2g0006 583 Pfam Protein tyrosine and serine/threonine kinase 476 578 IPR001245 GO:0004672|GO:0006468
Sto2g0006 583 Gene3D Transferase(Phosphotransferase) domain 1 468 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0006 Sto-Chr2 50829 55473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0006 465 583 Strubbelig Receptor Gene Family AT4G03390 76.471 5.61e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sto2g0006 PK_Tyr_Ser-Thr 2.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0006 - - pvu:PHAVU_002G224200g 546.199