Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2521 TTGGATTTTGAGAATGTTAAAGTCATCTCCGCCGTGGGCCGCGGAGCCAAGGGTGTTGTGTTTGCAGCAACCATGAACGACCATGAGTTTTTCGCTCTCAAGGTCATCTCCAAGGCTTTGATACGAAAGAAGGGGAAGGCGCTCAACAACGAAGGCGGCGAGCGCAAGAGGGTATCGTTTGAGCAACACGTGCTGCGTCGTTTTGATCATCCGCTCTTGCCAAGATTGCGAGGCGTTTTGGAAACCGACAATATTATAGGCTACGCTATTGATTATTGCCCCGGTGGTAATCTCCATTCTCTCCGCAAAAGGCAGACCGAGAAGATGTTCTCCGATGATAGCATAAGGTTTTATGCCGTGGAATTGGTGCTGGCATTAGAGTATCTGCACAGCTTGGGGATTGTGTACAGGGATTTGAAGCCAGAAAACATAATGATCCAAGAAAGTGGTCACATAATGCTCGTGGATTTCGATCTCTCCAAGAAACTAAACCCCAAGTCTCCGCATTCCATGAGTTGCAACTCCTCCCCGGATTCCGATTCCCACTCCTCCAAGGCCGCCGCCATCAAGGACTTGAGGAAGCGACGCTTCTTTCGATTCTACAGTTGCTCCACTCCAACCACCTGGCCCTCTGACTCCGAATCCCCACCCGTTTCTCAATGGGGACGACGGAGCGAGTCCGACTCAGTGGAGAAGTCCAACTCCTTCGTTGGAACCGAGGAATACGTCGCACCCGAGGTCATTTCGGGAAAGGGCCATAATTTTGGTGTTGACTGGTGGTCATTGGGTGTGGTATTGTACGAGATGTTGTACGGCACGACGCCGTTTAAGGGAGACAACAGGAAGGAAACGTTTTACCGGATTTTAACCAAGGACCCGGAACTCACGGGAGAAAAGACGGCGCTCAGGGATTTGATAGCGAAATTGTTGGAGAAGGATCCTGACCGTCGGATTGACGTCGACGGAATCAAGGGCCACGATTTCTTTAGAGGGGTTTATTGGGACACGGTTTTGCAGGTGTCGCGGCCGCCCTATATTCCTCTAAACGAAGTGGAGGACGACGCAAAGGGGTTAATGCAAAAAGAAGTGGAGGTTTTTGTCCATGAAATATTCtttggaaaggaaaaagaaacgaAAACGGAAGGTGGAGAGGCCAAGGGAGAGAATCATAATAACAAAAACGTGTGGGTAGACAAGTTGAGTAACAATCCCACTGacaatgaaaatttttttattttttga 1242 0.4807 LDFENVKVISAVGRGAKGVVFAATMNDHEFFALKVISKALIRKKGKALNNEGGERKRVSFEQHVLRRFDHPLLPRLRGVLETDNIIGYAIDYCPGGNLHSLRKRQTEKMFSDDSIRFYAVELVLALEYLHSLGIVYRDLKPENIMIQESGHIMLVDFDLSKKLNPKSPHSMSCNSSPDSDSHSSKAAAIKDLRKRRFFRFYSCSTPTTWPSDSESPPVSQWGRRSESDSVEKSNSFVGTEEYVAPEVISGKGHNFGVDWWSLGVVLYEMLYGTTPFKGDNRKETFYRILTKDPELTGEKTALRDLIAKLLEKDPDRRIDVDGIKGHDFFRGVYWDTVLQVSRPPYIPLNEVEDDAKGLMQKEVEVFVHEIFFGKEKETKTEGGEAKGENHNNKNVWVDKLSNNPTDNENFFIF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2521 413 MobiDBLite consensus disorder prediction 166 183 - -
Sto1g2521 413 Pfam Protein kinase domain 8 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2521 413 Pfam Protein kinase domain 227 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2521 413 MobiDBLite consensus disorder prediction 205 224 - -
Sto1g2521 413 MobiDBLite consensus disorder prediction 377 400 - -
Sto1g2521 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Sto1g2521 413 Gene3D Transferase(Phosphotransferase) domain 1 97 171 - -
Sto1g2521 413 Gene3D Transferase(Phosphotransferase) domain 1 227 348 - -
Sto1g2521 413 MobiDBLite consensus disorder prediction 205 232 - -
Sto1g2521 413 PANTHER FLIPPASE KINASE 1-RELATED 1 389 - -
Sto1g2521 413 SUPERFAMILY Protein kinase-like (PK-like) 7 353 IPR011009 -
Sto1g2521 413 MobiDBLite consensus disorder prediction 377 393 - -
Sto1g2521 413 Gene3D Phosphorylase Kinase; domain 1 7 96 - -
Sto1g2521 413 ProSiteProfiles Protein kinase domain profile. 6 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2521 413 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 1 389 - -
Sto1g2521 413 SMART serkin_6 6 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2521 413 MobiDBLite consensus disorder prediction 166 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2521 Sto-Chr1 32661372 32662724 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2521 1 413 AGC Kinase Gene Family AT3G25250 58.392 8.27e-156 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto1g2521 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2521 K20714 - gmx:100785773 502.671