Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2507 ATGGgTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTtggaggaagaagagaaaGTATGAGCTTGGTCGTCAGCCAGCAAACACTAAGCTTTCAAGCAACAAGACAGTCAGAAGGATTCGTGTTAGAGGCGGCAATGTGAAATGGAGGGCTTTGCGATTGGACACAGGAAATTATTCATGGGGTAGTGAAGCTGTAACTCGCAAGACACGTTTATTAGATGTGGTTTACAATGCCTCTAACAATGAGCTTGTGCGAACTCAGACCCTGGTGAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGTAGGAAGAAGAAAACAGCTGCCAAGAAGGACTCTACAGAGGAGGGTGAAGCTCCTGTTGAAGAGGTAAAGAAAAGTAACCATGTACAAAGAAAACTGGAGAAGCGCCAGAAAGATCGTACACTTGATCCCCACATTGAAGAGCAGTTTGGCGGTGGCCGATTGCTGGCTTGCATCTCATCTCGCCCTGGTCAATGTGGCAGAGCCGATGGTTACATATTGGAAGGCAAGGAGCTGGAATTTTACATGAAGAAACTccagaggaagaaggggaagggtGCTGGTGCTGCTTGA 660 0.4424 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSTEEGEAPVEEVKKSNHVQRKLEKRQKDRTLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2507 219 MobiDBLite consensus disorder prediction 1 40 - -
Sto1g2507 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Sto1g2507 219 MobiDBLite consensus disorder prediction 129 163 - -
Sto1g2507 219 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Sto1g2507 219 Gene3D - 26 212 - -
Sto1g2507 219 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Sto1g2507 219 MobiDBLite consensus disorder prediction 11 26 - -
Sto1g2507 219 CDD Ribosomal_S8e_like 5 196 - -
Sto1g2507 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 - -
Sto1g2507 219 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Sto1g2507 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2507 Sto-Chr1 32519527 32521876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2507 1 219 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.909 4.71e-129 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2507 K02995 - cit:102615250 407.912