Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2500 ATGGCCCCATCTTCAGCATCAAGCTTGGCTTCCAACGCATACTCGTTGTCAGCAACAGAGAAATTTGCCAAAGAATGCCTCTCCACCATTGACACAGTCTTTGCAACCAGGCCCAACATAGCAGCAGGCATAAGAGACGCAACGTATCTGAGTGGAGTATTGGTGGAGGAAGACGCATTGCCATCAACAttattgggtttgggtttggggattgagaAATGGGTGGACTTTCAAGGACATGTGAGGTCCATGAACACAACTGCCGCCCAAATTGATTCTGTGCTTCACAAGTGGCTACAACACCACTTGCACAAAACCAATCATCATACCCAAACTGACTTCATCGACCTTTTGATTTCTACCTTCGCCAACCAAACTCATTTTTGTGGCCATAAACGAGACAATATCATCAAGGCTACAGCcctgACTATTATGTTCACAGGAACAGGAAGCACATCCGTAACCTTAACATGGGCACTTTCACTACTCCTAAACCATCCAAATGCGCTAAAGAAAGCCCAAGAAGAGCTAGACACCCAAATAGGCACTCACACATGGGTACAAGAATCAGACATCAAAGAGCTTCATTACCTTCAGGCCATTATCAAAGAGACTCTTCGTCTCTACCCTCCAGCTCCCTTAACTGGAATCAGAGAAGCCATGCAAGATTGCTCCCTTGCAGGCTACCATGTCCCTAAGGGCACTCGTCTTCTTGTCAACATCTGGAAGATTCAGAGGGACCCACAAATATGGTCCAATCCTAATGAGTTTCAGCCTGAGAGGTTCTTGAAGGATCCTCATCAACATCTTGAGTTCAAGAGTGGTATGAATTTTGAGTATATTCCTTTCAGTTTTGGAAGAAGGTCATGTCCTGGTATGAACTTTGGCCTTCAGGTTATCAACTTGACGCTGGCTCGCCTACTTCAAGGCTTCGATATGTCGGTGACCGAACCGGTGGACATGAGCGAAGGTTTAGGTTTGTCATTGCCTAAGCTTAATCCTCTTCATCTTATGCTCAAACCCCGTTTACCTTTGGAGCTTTACGAGAgtctttaa 1056 0.4394 MAPSSASSLASNAYSLSATEKFAKECLSTIDTVFATRPNIAAGIRDATYLSGVLVEEDALPSTLLGLGLGIEKWVDFQGHVRSMNTTAAQIDSVLHKWLQHHLHKTNHHTQTDFIDLLISTFANQTHFCGHKRDNIIKATALTIMFTGTGSTSVTLTWALSLLLNHPNALKKAQEELDTQIGTHTWVQESDIKELHYLQAIIKETLRLYPPAPLTGIREAMQDCSLAGYHVPKGTRLLVNIWKIQRDPQIWSNPNEFQPERFLKDPHQHLEFKSGMNFEYIPFSFGRRSCPGMNFGLQVINLTLARLLQGFDMSVTEPVDMSEGLGLSLPKLNPLHLMLKPRLPLELYESL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2500 351 PANTHER CYTOCHROME P450 82G1 43 349 - -
Sto1g2500 351 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 283 292 IPR017972 GO:0005506|GO:0016705
Sto1g2500 351 SUPERFAMILY Cytochrome P450 70 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 22 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 136 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 156 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 240 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 280 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS E-class P450 group I signature 290 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 Gene3D Cytochrome P450 57 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PANTHER CYTOCHROME P450 82C3-RELATED 43 349 - -
Sto1g2500 351 Pfam Cytochrome P450 77 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS P450 superfamily signature 147 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g2500 351 PRINTS P450 superfamily signature 281 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2500 Sto-Chr1 32465073 32469879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2500 43 348 Cytochrome P450 AT4G31970 45.541 8.84e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2500 K17961 - gmx:100791088 384.03