Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2499 ATGGTGGtgggagagaaagagaaagaaagagaatatatgGAAGGATTAGAAATAATATCGAGGAGCATAGTTGAAGCTGAAAATCAGGAAGCTGATTTGGGTACAAAAATAGAGTTAACCCCATGGGATCTCCGACTGTTCCACGTTGAGGGTATTCAGAAGGGACTACTTTTTCATATCCCCAACTTCACCGACGTGGCTTTCAGCACTGTTAATCACCTTaaacactctctctcctctacCCTTCACTTCTATCCTCCGCTTGCCGGACGTCTTTCCATTGATGAACACCACGATGCTACTTGCTCTGTTTCCATCATTTGCAACAACCTCGGTGTCTTATTTGTTCACGCTGTGGCGCATAATACCTCTGTTTCTCACATTCTACAACCCACCTACGTTCCTCCCATACTCCACTCCTTCTTCCCGCTTAACGGTGTTAAGAACCACCAAGGCACCTCCCATCCTCTCTTGGCCGTCCAAGTCACGGAGTTAGTAGACGGCGTCTTCATCGGCTGTTCCATGAATCATTGCGCTGCAGACGGCACGTCCTTTTGGGATTTCTTCAAATCTTGGGCCCAACTCACCCGATGCGCAGGCAGTGGCACACACACAATACCATCCAACCTTCCCTCATCACTACTTCATCGCTGGATTCCCGATGATATGAATCGCCCCATCCGCTTTCCTTATACGAAGCAACACAACGACGAAGGGTTGATTGTTTCGCCTTCACAAGTTCCACCGGAGAGGATGTTTCACTTTACCAACCAAAACATCGCTCAACTGAAAGCAAAAGCCAACGCAGAGGTGGTCAAACTAAAAAACGACACCAACAACAATATTACAATTTCCTCTCTGCAAGCACTTTTAAGCCATATTTGGGGACGTGTTATTGAACACCAACATCTTAGTCCAGAAGAAGAAGTTAGTCTAAAATTAGTGATAGGTGGTAGGCAGAGAATGTTGGATCCTGGGTTAGCAGAGAGGTATTTCGGAAACGTAGTACATGGGTGTACTTTAAGCATGAAAGCAGGGGAGTTGGTTGAGGGTGGGTTGGGAAATGGTGCTTTGGAAATGAATAAGCTGATTGGTTTACACACGCAAGAGAAGCTCATGGGGTACTACAAGGGTTGGGTTAAGAATCCTGTTTTTGGTGGTGGTTCACGTAAGAATACTTTGGTCGTAAGCAGTGACCCGCGGTTCGATGTTTACGGCAACGACTTCGGATGGGGAAAGCCGGTGGCGGCTCGATGTGGCGTTGCGAATAAAAATGATGGGAAGATTACATTATATGCGGGAGCAGAGGAAGAGTTAACCCCATGGGATCTCCAACTTCTCCGGGTTGGAGGTATTCAGAAGGGACTAGTATTTCACATCCCCAACATTAAGGATAAGGATGTCGTTTTCAACACTCTCCATCACCTTAAACGCTCTCTCTCCTCTACCCTTCACTTCTTTCCTCAACTCGCCGGACGTCTCTCCATTGAGCAACACGTGGATGCTACTTGCTCTGTTTTCATCATTTGCAATAACCTCGGTGCCTTATTTGTTCACGCAGCAGCACATAATACCTCTGTTTCCCACATTCTACAATCCACCCACGTCCCTCGCATCCTTGCCTCCTTCTTCCCCCTTAACGGAGTTAACAACTACCAAGGCACCTCCAACCCCTTGTTGGCCGTCCAACTCACGGAGCTTGCAGACGGCGTCTTCATCGGCTGTTCTATGAATCACTGCGTTGCAGACGGCACGTCCTTTTGGAATTTCTTCAAATGTTGGTCCCAAATCACCCGACATGGAGGCACACTACTACCCTCCACTTCCAATCCTCATCGCTGGTTTCCTGATGCTATCAATCGCCCCATTCGCTTTTATTATACACACCAAAACCACAACACTCACGATCATGGCTTCATTTCACAACCGCCACCAGAGAGGGTGTTTCACTTTACAAAGCAAAGGATCGCAGAATTGAAAGCCAAAGCCAACGCAGAGGTCAAACTACTAAAACTGAAAAACCACAACACCAAAATAACAATATCCTCTCTCCAAGCACTTACAAGTCATATTTGGGGATGTGTTATAAGACACCAACATCTTGATCCGCAACAACAAGTTTGTCTAATGGTAGCCATAGGGGCTAGACAGAGAATGTTGGATCCTCCGTTAGCTGATAACTATTTCGGAAACGCAATGCAAGTGAGTATCTTAAGAATGAAAGCAGGGGAGTTTGCGAAGGGTGGATTGGGAAATGCTGCTATGGAAATGAATAAGCTGATTGGGTTATACACACAAGAGAAGCTCAAGAGTTGCTACGAGGGATGGGTGAAGAAACCAGAGCTTTATGTACCAGAAAAGCACACTCTAGTCATAAGCAGTTCTCCCAGGTTCGATGTTTACGGTAACGATTTTGGGTGGGGAAAGCCTGTGGCGGTTCGAAGTGGCGTTGCTAATAAGTTTGATGGGAAGATTACTTTATTTGGGGGAACGCAGGAAGGAAGTATTGATCTCCATGTTTGCATTGCTAATCACATATTAGAGGCCATAGCCAAGGATGCACTTTAA 2568 0.454 MVVGEKEKEREYMEGLEIISRSIVEAENQEADLGTKIELTPWDLRLFHVEGIQKGLLFHIPNFTDVAFSTVNHLKHSLSSTLHFYPPLAGRLSIDEHHDATCSVSIICNNLGVLFVHAVAHNTSVSHILQPTYVPPILHSFFPLNGVKNHQGTSHPLLAVQVTELVDGVFIGCSMNHCAADGTSFWDFFKSWAQLTRCAGSGTHTIPSNLPSSLLHRWIPDDMNRPIRFPYTKQHNDEGLIVSPSQVPPERMFHFTNQNIAQLKAKANAEVVKLKNDTNNNITISSLQALLSHIWGRVIEHQHLSPEEEVSLKLVIGGRQRMLDPGLAERYFGNVVHGCTLSMKAGELVEGGLGNGALEMNKLIGLHTQEKLMGYYKGWVKNPVFGGGSRKNTLVVSSDPRFDVYGNDFGWGKPVAARCGVANKNDGKITLYAGAEEELTPWDLQLLRVGGIQKGLVFHIPNIKDKDVVFNTLHHLKRSLSSTLHFFPQLAGRLSIEQHVDATCSVFIICNNLGALFVHAAAHNTSVSHILQSTHVPRILASFFPLNGVNNYQGTSNPLLAVQLTELADGVFIGCSMNHCVADGTSFWNFFKCWSQITRHGGTLLPSTSNPHRWFPDAINRPIRFYYTHQNHNTHDHGFISQPPPERVFHFTKQRIAELKAKANAEVKLLKLKNHNTKITISSLQALTSHIWGCVIRHQHLDPQQQVCLMVAIGARQRMLDPPLADNYFGNAMQVSILRMKAGEFAKGGLGNAAMEMNKLIGLYTQEKLKSCYEGWVKKPELYVPEKHTLVISSSPRFDVYGNDFGWGKPVAVRSGVANKFDGKITLFGGTQEGSIDLHVCIANHILEAIAKDAL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2499 855 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 438 854 - -
Sto1g2499 855 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 437 - -
Sto1g2499 855 Gene3D - 249 438 IPR023213 -
Sto1g2499 855 Pfam Transferase family 16 435 - -
Sto1g2499 855 Pfam Transferase family 439 853 - -
Sto1g2499 855 Gene3D - 628 852 IPR023213 -
Sto1g2499 855 Coils Coil 257 277 - -
Sto1g2499 855 Gene3D - 439 622 IPR023213 -
Sto1g2499 855 Gene3D - 15 222 IPR023213 -
Sto1g2499 855 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 438 854 - -
Sto1g2499 855 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2499 Sto-Chr1 32456354 32461196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2499 476 852 Monolignol Biosynthesis Gene Families AT5G48930 26.650 5.32e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2499 - - pvy:116114536 409.838