Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2497 ATGGGAAGAGTCCGAGTGATCTCTACTTGTGCAGTTCATGCGTCTACTTCGTgttccaataataataataataataatatgagccACTTAACTCCATGGGATCTTCAAATCCCTGCACTTGCTTACATCCAGAGAGGGCTTCTGTTTCCCAATCCCAAATCAcctaatcataataataatatcgtTGAACACCTCAAACACTCTCTTTCTGGAGCTCTCGACTTGTTTCCTCCTCTTGCTGGACGCCTCGCTTTTCAACAACACCTCCATGACCATACCTTCTCTGTTTCCATCCTATCTAACAACGCTGGTGCTTCATTTGTTCATGCCATCGCTGAGGATACCACCCTTTCAGACATTCTCCGCCCCACCTATGTTCCTCCCTTCGTCCGACAATTCTTTCAACTTATTACAAACGACGACGAACCCACTTCCAAGCCACTTTTGGAGGTGCAAGTCACGGACCTAGCAGACGGTTACTTCCTGGCTTGCTCTATCAACCACTGTGCTGTGGACGGCACCTCCTTCTGGCATTTCATTAATTGTTGGGCCCAAATCTCGCGTGGGCTACACTCTGTCTCCAACATCCCTGTGCTTCAACGTTGGTTTCCCAGTGGCGTTGATCCACCCATTTGGGTTCCAACTTATATCAAGCAAATGCAACACAGAGACGGCCCCACTTGTTCGGAGTCGTGGAAGTTGTCAGAAGATTCAGCCGAGAGGCTGTTCCACTTCACCAAACAAAACATTGCGCAACTCAAAGCAAAAGCCAACGCAGATGTAGAGTTAAACCAAAAGGACAACAAAGTAACGAGGATATCCTCTTTGCAAGCAGTTTTAAGTCATATTTGGCGTTGTATTGTTCGCAATCAACGACATGATCCCAGAAGAAGAGTTGAGTCGGCTTACATAATAATGAAAGCAAAGGAAATAATGGTGGAGGGAGGAGTGGGGAAGGCAGCTTTGGAAATGAATAACATGATTGGGTTATACACAGAAGAGATGCTTAAGAGGTCGTATGAGAGTTGGGCGAAACATCCTTTTTATGTGGAACATAGTAACATGAAACATACGACTGTACTTGTAAGTAGTTCTCCCAAGTTCGATGTTTACGCTAATGACTTCGGGTGGGGACAGCCGATTGCAGTTCGGTGTGGGCCCATGATTTACGCTCACGGGAGTCTTATTTTGTTCCAAGGGGCAGAAGAAGGGAGACGTCTCGCTTATCAACAACATTTGCACGACCACTCCTCTGTTTCAATCCTCTGTAACAATGCCGGTGCTCTGTTCGTTCATGCCATCGCTGATGACACCACCGTCTCAGACGTTATCCATCCCACCTATGTTCCTCCCATTCTCCAACAGTTTTTCCAACGACTTGACGCACCCGAaatcacttccacttccacaccACTGTTGGAGGTCCAAGTCACAGAGCTAGTAGACGGACTCTTCATCGCCTGCTCTGTCAGCCACTGTGTTGCAGACGGCACGTCATTCTGGCATTTCATTAATTCTTGGGCCGAAATCTCGCGAGGACTTCAAGCACTGTCCAACCTCCCTATTTTGGAACGCTGGTTTCCCAGTGGCGTTGATCCACCCATTCGGTTTCCAAGTCATATGAAGCAAAAGCAAGGCTTCAATTTTTCAAGGTCACCACTATCAGCAGAGAGGGTGTTCCACTTCACCAAACAAAACATTGCCCAACTCAAAGCAAAAGCCAACGCAGAGTTAAACACTAATAATAAAATCACGATATCGTCTCTGCAAGCACTTATAAGTCATATTTGGCGCTGCGTTGTTGGGAATCAAGGACATGATCCAGAAGCGGATGTACATTTGATTTTACCAGTGGGTGTTAGGCAAAGAATAATGGAACCACCATTGGGAGCGAATTACTTTGGAAATGCAGTAAAGGCATGTTTCATAAGGATGAAAGCAAAGGAATTGTTGAAGGGAGGAGTGGGGAAGGTTGGTTTGGAAATAAACAAAACCATTGGATTACAAACACAAGAGGAGCTTAAGAGGTACTGTGAGGATTGGATCAAACATCCTGATTTTGAGAAACATAGAGAGATGAGACATAATAATACCGTGATTATAACTAGTTCTCCCAAGTTCGATATTTACGGGAATGACTTCGGGTGGGGACAGCCGGTAGCTGCTCGATGTGGGCCCATGATTTACTCTGATGGGAATATTACGTTGTTGGAAGGAGCAGAGGAAGGGAGTATTGACGTTCTTGTTTGCATTGGTTATGACATACTAGAGGCCATGGCAAACGACTCTCAGTTCATGGATCTTCTTTCCCTCTAG 2316 0.4447 MGRVRVISTCAVHASTSCSNNNNNNNMSHLTPWDLQIPALAYIQRGLLFPNPKSPNHNNNIVEHLKHSLSGALDLFPPLAGRLAFQQHLHDHTFSVSILSNNAGASFVHAIAEDTTLSDILRPTYVPPFVRQFFQLITNDDEPTSKPLLEVQVTDLADGYFLACSINHCAVDGTSFWHFINCWAQISRGLHSVSNIPVLQRWFPSGVDPPIWVPTYIKQMQHRDGPTCSESWKLSEDSAERLFHFTKQNIAQLKAKANADVELNQKDNKVTRISSLQAVLSHIWRCIVRNQRHDPRRRVESAYIIMKAKEIMVEGGVGKAALEMNNMIGLYTEEMLKRSYESWAKHPFYVEHSNMKHTTVLVSSSPKFDVYANDFGWGQPIAVRCGPMIYAHGSLILFQGAEEGRRLAYQQHLHDHSSVSILCNNAGALFVHAIADDTTVSDVIHPTYVPPILQQFFQRLDAPEITSTSTPLLEVQVTELVDGLFIACSVSHCVADGTSFWHFINSWAEISRGLQALSNLPILERWFPSGVDPPIRFPSHMKQKQGFNFSRSPLSAERVFHFTKQNIAQLKAKANAELNTNNKITISSLQALISHIWRCVVGNQGHDPEADVHLILPVGVRQRIMEPPLGANYFGNAVKACFIRMKAKELLKGGVGKVGLEINKTIGLQTQEELKRYCEDWIKHPDFEKHREMRHNNTVIITSSPKFDIYGNDFGWGQPVAARCGPMIYSDGNITLLEGAEEGSIDVLVCIGYDILEAMANDSQFMDLLSL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2497 771 Gene3D - 539 761 IPR023213 -
Sto1g2497 771 Pfam Transferase family 27 297 - -
Sto1g2497 771 Pfam Transferase family 321 405 - -
Sto1g2497 771 Pfam Transferase family 417 763 - -
Sto1g2497 771 Gene3D - 410 534 IPR023213 -
Sto1g2497 771 Gene3D - 2 208 IPR023213 -
Sto1g2497 771 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 406 768 - -
Sto1g2497 771 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 404 - -
Sto1g2497 771 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 404 - -
Sto1g2497 771 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 406 768 - -
Sto1g2497 771 Gene3D - 235 409 IPR023213 -
Sto1g2497 771 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2497 Sto-Chr1 32447535 32451667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2497 415 751 Monolignol Biosynthesis Gene Families AT5G48930 27.841 1.58e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2497 - - tcc:18611162 349.362