Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2483 TTGAAAACAATTATGGATAATATGGAACTAGTTGAGAAAATTGTGATTTCTACTGAGACTCCAACTCCCAATAAGAGAATGTTCTTGTCAAATATTGATTTGTCACTTGTAGTTTATCAAGATTCTGCCTCCTTCTTTGATCCTCCAAGCATCAAAATGAGCTTCTCTGAGATTTGCAACAAGTTATATTGTGCTCTAGCTCAAATGCTTCTGCATTATGACTTCATGGCTGGCCGGCTCATGCCGAGTTTGGAAGATGATGATCGGTTGGAGATAGACTGTAACGGCGCCGGTATTGTGGTTGCCGCAGCAAGAACCGATGAAAAGTTGAGTGAATTTGGTGTGATTTCTTTATCTAATCCAAAGTTAAGGCAGCTTATTGGTTTCTTGCGTGAAGATGGTGAAGAAATTGACCTCAAAGACAAGCCACTTGCATCTTTACagCTAACTCAATTTGGATGTGGAAGCTTAGCACTTGCTTCTCACTACAACCATTGCACACTTGATGGAATAGCAATAAGAGACTTTGAAGTAAACTTAGCTGCTTTAACAAGAGGTGACAACTTCATAGTAATACCTTATGCAGATAGGACACTTCTCAAAGCCAGAAGCCCTCCAAAAATCACTCATCCACATTATGAGTACTCAAAAACCACAGACACAGACAACCTATTCACTAATCGCAGCACCAACATTACTGCGACACGCCAATCCACAGCCAAAAACCAAGTCCATGTGCTTCACTTATCACCACACCAAATTTCCAGCTTCAAAAAGAAAGCCATGAAGTCTAGCAACTTAAACAACATAACCACCACCTTTCAAGTGGTAGCAGCCAGAATATGGAAGGCAAGAAGCATTGCCATGAAGATGCCGGAGGAGAACACATCAACGATGCTTTTCCCAGTTGATGCAAGGAAAAGGGTTGTCCCGGAGCTTCCAGAAGGATTTGCAGGTAATGCATTGGTTCCTGCGTTTGCAAGGGCAAGTGTGAGGGAACTGATGGAACTAGAGGATGCTTGCATCATAAGAAAAGTGCAAGAAGGGATTGAGAGGTTGGATGATGAGTATGTGAGGTCAGGGATAGATTGGTTGGAGGTGAATAGAGGAGTGCCTTGTAGGGAAGATAGTTTTTCTTTGGTGGCATGGTGGAGATTAGGGTTAGAGGAACAAGAATTTGCATGGGGTAGGCTAAAGTTTGCTACTCCACTTGAAGTTAAGCCTGGTTTGGTTATGATGTTGCCAAGGACAGAAGGTGAAGGAGGAGTTAGTATTTGTCTGGATTTACCTGAGGACCAAATGCAAGAGTTTTGCAGGATAATGATGGAAGTATGA 1335 0.4217 LKTIMDNMELVEKIVISTETPTPNKRMFLSNIDLSLVVYQDSASFFDPPSIKMSFSEICNKLYCALAQMLLHYDFMAGRLMPSLEDDDRLEIDCNGAGIVVAAARTDEKLSEFGVISLSNPKLRQLIGFLREDGEEIDLKDKPLASLQLTQFGCGSLALASHYNHCTLDGIAIRDFEVNLAALTRGDNFIVIPYADRTLLKARSPPKITHPHYEYSKTTDTDNLFTNRSTNITATRQSTAKNQVHVLHLSPHQISSFKKKAMKSSNLNNITTTFQVVAARIWKARSIAMKMPEENTSTMLFPVDARKRVVPELPEGFAGNALVPAFARASVRELMELEDACIIRKVQEGIERLDDEYVRSGIDWLEVNRGVPCREDSFSLVAWWRLGLEEQEFAWGRLKFATPLEVKPGLVMMLPRTEGEGGVSICLDLPEDQMQEFCRIMMEV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2483 444 Pfam Transferase family 9 438 - -
Sto1g2483 444 Gene3D - 219 442 IPR023213 -
Sto1g2483 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 443 - -
Sto1g2483 444 Gene3D - 6 217 IPR023213 -
Sto1g2483 444 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 6 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2483 Sto-Chr1 32355240 32357422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2483 17 444 Monolignol Biosynthesis Gene Families AT5G48930 27.689 2.19e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2483 K15400 - gmx:100801822 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2483 1 32355240 32357422 Sto1g2483 1 32355240 32357422 ECH