Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2477 ATGGGTGGAAAGTGTCCGCATAGAAGCGTAAAGAAGCGAAGGTATTCTCACAAGACGGCTCGTCGTACCAAATTTCTGGTCAAAGGAGATGACATGGTTTATGATGAGCTGAAAAAGCCAGATGAAGAGAGGAAAGCTCTACCTTTAGATGAAGATTTACCTGGAATGGGACAGTATTACTGCCTCCACTGCGATCGATACTTCCCTAATGTGGCTGTGAGGGATGATCATTTTAAGACCAAACGACACAAGAAGCGTGTAAAACAAATGATGGGACCTGCACCACACACTCAACTCGATGCCGAATTAGCTGCTGGGATGGGTATGCCAGATAACGGCCCAAAGCTAATGTCTATTTGA 360 0.4528 MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDEERKALPLDEDLPGMGQYYCLHCDRYFPNVAVRDDHFKTKRHKKRVKQMMGPAPHTQLDAELAAGMGMPDNGPKLMSI 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2477 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Sto1g2477 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Sto1g2477 119 Gene3D Classic Zinc Finger 45 109 - -
Sto1g2477 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Sto1g2477 119 PANTHER EXPRESSED PROTEIN 1 118 - -
Sto1g2477 119 SUPERFAMILY beta-beta-alpha zinc fingers 46 110 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2477 3 118 C2H2 Transcription Factor Family AT2G36930 79.310 5.48e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2477 K14821 - qsu:112025713 235.728