Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2467 ATGTGCAAAACAAGTAAGAAGTCAGGAGGCATGAAGGTATGGtgggtgtttggggttttgggattggtgATTATCAAATTGGTAGAAGGTTTTGAGGATGCAAATGTGACAGCCATGCATTATGTCAAGAGAAGGGGTTTCAATAACAGACCTCTAATGGTGGGTCTTACTCTTATTAATGGAGCTGCTGCCAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGCTTACCATCTTCACCGTGGCTATGGTTCAGGATCAAACAGTTGGCTCATACAATTGGAGGGTGGAGGCTGGTGTGGAAATATCAGAACGTGCTCTTACAGTAGGAGAACTCGTCATGGTTCATCCACACATATGGAAAAGCAGATACCATTCATTGGAATATTGAGTAACAAAGCTGAGGAAAACCCTGATTTTTACAACTGGAACAGAGTGAAACTTCGTTACTGTGATGGTGCATCCTTTAGTGGGGACAGTCAAAATAAGGCAGCAGGGTTGTATTTCAGAGGACAACGCATCTGGTTAGCCGCCATGGAAGATTTGATGTCAAAGGGGATGCGCTATGCCAATCAGGCTCTTCTATCTGGATGTTCTGCCGGAGGTGTAGCGTCTATACTTCACTGTGATGAATTTCGGGAACTATTTCCTGCCACCACAAGAGTCAAGTGCTTAAGTGATGCTGGATTGTTCCTTGATAGTGTTGATGTATCTGGCAGTCGCACTTTGAGGAACATGTTCAGAAGCATCGTCTCCTTACATTGCTTCTTTCCTCAGTACTTAATTTCCAGTGTTAGGACACCACTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAGGCCAGTATAGCACCACCATCAGCGGATCGTAGATGGAATTGGTTTGAGTGCAGAAAAAACTATTTAAGTTGCAGTGCATCACAGATAAATTATCTTCAAGGATTTCGAAGTCAAATGCTCAATGCTGTGAGAGGATTTTCGAGGTCTCGCAAAAACGGATTATTCATAAATTCATGTTTTGCACATTGCCAGACTGAAAGACAAGATACATGGTTTGCCTACAATTCTCCCCATATTGGAAGCAGAGGTATAGCAGAGTCTGTGGGAAATTGGTTTTTTGACAGAGTTCAAATACAAGCTATTGGTTGTGCTTACCCATATTCTGATACTCCCACCAATAAAGAGAAGCGTCATTTCAATCTGAAACCCACCCTCATCCCCATTAATTTACTTTTCTCTCAGGTTGAAATTATTTGCTTCTGGAATACAATGCCAGAAGAGAAATTATTACACCGACAAGATGAGAAGGGTAGATGTTTTGAGCCAGAGACCTCAGAAGATGAGGGACAAAAGTCTCGGGCCAGATCTCTTAGGAGAAAAGCAACAAATCATTCCACAAGACTCTCTTATGGTCTCCGGAATCGGAATAGGCGCGTAGTTGATTATCGCTTTGCTTCAATTTTCATAGAGGATGTTCGTGATGCCAATGAGGAAGAATCTGTGAATTCATTTCGTAAGGCACTGCTTGCGAAAGATTTGCTTCCAGCTGCCCTCGATGATTACCACACAATGCTGAGATTTCTAAAGGCCAGAAAGTTTGACATTGATAAAACAGTCATCATGTGGGTAGATATGCTCTGTTGGAGGAAAGAGAATGGAGTAGATTCTATTCTTCAGGATTTCACATATGATGAGTATGAAGAGGTTCAACGTTATTATCCTCATGGTTACCATGGTGTGGACAAAGAGGGACGACCAGTTTATATTGAAAGACTCGGCAAAGTTGAACCCAGCAAATTGATGCATGCAACCACCGTAGatcgatttttaaaatatcatgttCAGGGATTTGAGAAATCCTTTAAAGAAAAATTCCCAGCTTGCTCTATTGCAGCAAAACGGCACATAAGTTCAACAACTACAATACTGGATGTAGTCGGCGTGAATTGGGTGAGCTTCAGCAAAGTAGCACGTGATCTTTTCATGCGTATTCAAAAAGTTGATGGTGATAACTACCCTGAGACGTTACACCAGATGTTCATAGTAAATGCTGGTAGTGGGTTCAAGATGGTGTGGAGCACAGCAAAAGGTTTTCTTGATCCAAAAACCGCAGCAAAAATACATGTTCTAGGTAACAAGTTCCAGAGCAAATTATTAGAGGTTATAGACTCGAGCCAACTTCCAGATTTCCTCGGTGGAAGTTGTTCATGCAAAAATGAAGGAGGGTGTCTCAGATCTGACAAAGGACCTTGGAACAATCCTGACATTATGAAATTAATACATGCTGGAGAAACAACGAAGCAGATACAATCTTCAAGCTCTAAAATATCTCAAACTGGATCAGAATCAGATGCAAGGCCAAGTCCTTCAGCCTGCATGCAGTCTATTCGTTCTATTGAGAAAAAAAGGTTGAGAAACCATGCACCTATCTGCAGCCTAGTTGAGCCAGTCAATTCTGTCAGAGAAGTTGAGGATATTAATTCGTTAAATGGCTCAAACAATACTAATCTGAGAAGACGGCTAAAGTTAATTCCCTACATCACAAGCATAGTTGTACAAATCATACTAAAAGCATTAGCATGTATATATGAAGTATTCACCGGCTTGGGGAAATATTTTGTGCTTCAGTCTGCACGTAGCCCGCCAGGAAGCAATCAGAATACCCATCCTACTGAATCGAAGTATCAAGAATCATTCATCTCCCAGTCATTAAAAGATCCACTTTTGCAGAGGTTGCAAAATTTAGAAGCAACAGTAACTGACATAGGCAGAAAACCTACGGGAATTCCGCCTGAGAAAGAGATTATTCTTCATGAGTCTCTGAATCGTATAAGATCTATAGAATATGACTTGCAGAAGACAAAGAAGGCACTGCTAGCTACTGCATCTAAGCAAGTTGAGCTTGCCGAGTCACTGGAAAGCTTAAAGGACACTAAGTTTGACGTAAGTTGCTTTCGTGATCCCATTTCATGTGCATTCCCTGTCTTATCTGATGTAGAATATGCCAGAAGCTGA 3021 0.4088 MCKTSKKSGGMKVWWVFGVLGLVIIKLVEGFEDANVTAMHYVKRRGFNNRPLMVGLTLINGAAAKGAVCLDGSLPAYHLHRGYGSGSNSWLIQLEGGGWCGNIRTCSYSRRTRHGSSTHMEKQIPFIGILSNKAEENPDFYNWNRVKLRYCDGASFSGDSQNKAAGLYFRGQRIWLAAMEDLMSKGMRYANQALLSGCSAGGVASILHCDEFRELFPATTRVKCLSDAGLFLDSVDVSGSRTLRNMFRSIVSLHCFFPQYLISSVRTPLFLLNAAYDTWQIQASIAPPSADRRWNWFECRKNYLSCSASQINYLQGFRSQMLNAVRGFSRSRKNGLFINSCFAHCQTERQDTWFAYNSPHIGSRGIAESVGNWFFDRVQIQAIGCAYPYSDTPTNKEKRHFNLKPTLIPINLLFSQVEIICFWNTMPEEKLLHRQDEKGRCFEPETSEDEGQKSRARSLRRKATNHSTRLSYGLRNRNRRVVDYRFASIFIEDVRDANEEESVNSFRKALLAKDLLPAALDDYHTMLRFLKARKFDIDKTVIMWVDMLCWRKENGVDSILQDFTYDEYEEVQRYYPHGYHGVDKEGRPVYIERLGKVEPSKLMHATTVDRFLKYHVQGFEKSFKEKFPACSIAAKRHISSTTTILDVVGVNWVSFSKVARDLFMRIQKVDGDNYPETLHQMFIVNAGSGFKMVWSTAKGFLDPKTAAKIHVLGNKFQSKLLEVIDSSQLPDFLGGSCSCKNEGGCLRSDKGPWNNPDIMKLIHAGETTKQIQSSSSKISQTGSESDARPSPSACMQSIRSIEKKRLRNHAPICSLVEPVNSVREVEDINSLNGSNNTNLRRRLKLIPYITSIVVQIILKALACIYEVFTGLGKYFVLQSARSPPGSNQNTHPTESKYQESFISQSLKDPLLQRLQNLEATVTDIGRKPTGIPPEKEIILHESLNRIRSIEYDLQKTKKALLATASKQVELAESLESLKDTKFDVSCFRDPISCAFPVLSDVEYARS 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2467 1006 SMART CRAL_TRIO_N_2 522 547 IPR011074 -
Sto1g2467 1006 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 433 987 - -
Sto1g2467 1006 MobiDBLite consensus disorder prediction 441 464 - -
Sto1g2467 1006 CDD SEC14 568 735 IPR001251 -
Sto1g2467 1006 MobiDBLite consensus disorder prediction 441 457 - -
Sto1g2467 1006 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 567 741 IPR001251 -
Sto1g2467 1006 Gene3D - 492 554 - -
Sto1g2467 1006 Pfam Pectinacetylesterase 50 254 IPR004963 GO:0016787
Sto1g2467 1006 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH9 433 987 - -
Sto1g2467 1006 Pfam CRAL/TRIO domain 573 735 IPR001251 -
Sto1g2467 1006 SMART sec14_4 567 738 IPR001251 -
Sto1g2467 1006 SUPERFAMILY CRAL/TRIO N-terminal domain 496 562 IPR036273 -
Sto1g2467 1006 Gene3D - 555 766 IPR036865 -
Sto1g2467 1006 MobiDBLite consensus disorder prediction 767 794 - -
Sto1g2467 1006 SUPERFAMILY CRAL/TRIO domain 566 761 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2467 Sto-Chr1 32238835 32250806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2467 53 395 Carbohydrate Esterase AT1G57590 65.928 5.35e-173 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2467 - - gmx:100780520 764.992