Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2425 ATGGAAGATGAGGAAAAAGTAGCTAAAATTGAAGGAAGCCAAGGAGAAGATGCAACATCAAAAGTTTTTCCATGCCTTTTCTGTTCAAGAAAGTTTTGCAGTTCACAAGCCTTAGGAGGACACCAAAATGCCCACAAGAAAGAGAGAACAGCAGCAAGAAAAGCAAAAAAGGCTTCTTCAGAATACCCATATGTTGCTTTTGCTTCTTCCCTTCTGTCTCCTCCTATGGCATTTGATCCTATTCATCAAATGGGTCATTTTAATCCTTCCATGTTCATCACCCCACATGCTTCAAATTTTGGTTATTTCAAAACTCATCAAATTTCAGAACAGTTTGGATCAAATGGTGCTGCTAGATTTGGGAATGCTCAGTTTTCTGAGGCAAATTGTTCAATCAATGGATTCTGCGAAGACAATGATAGAAGTTTTGTGAACTGGAAAAGGAGCTTAAAGAGCAATCAAAATCTTGGATTTAGGAATCATAGTAAAGAGAATGATCAAAAGCTTGATTTGTCTCTTCATTTATAG 528 0.3712 MEDEEKVAKIEGSQGEDATSKVFPCLFCSRKFCSSQALGGHQNAHKKERTAARKAKKASSEYPYVAFASSLLSPPMAFDPIHQMGHFNPSMFITPHASNFGYFKTHQISEQFGSNGAARFGNAQFSEANCSINGFCEDNDRSFVNWKRSLKSNQNLGFRNHSKENDQKLDLSLHL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2425 175 SUPERFAMILY beta-beta-alpha zinc fingers 20 50 IPR036236 -
Sto1g2425 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Sto1g2425 175 Gene3D Classic Zinc Finger 2 68 - -
Sto1g2425 175 PANTHER PROTEIN LATE FLOWERING 13 175 - -
Sto1g2425 175 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Sto1g2425 175 PANTHER ZINC FINGER PROTEIN JAGGED 13 175 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2425 Sto-Chr1 31930258 31930785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2425 18 155 C2H2 Transcription Factor Family AT1G66140 34.459 4.31e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2425 - - gmx:100527084 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2425 1 31930258 31930785 Sto1g2425 1 31930258 31930785 ECH