Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2422 ATGGCGATCACGAAGCTTTTCTCTTTCTACATTTTTGTGTGCTTCTTCTTCAGTGCTGTCACAGAgtctttgtcttcttcttcttcttcatcatcatcttcttcttcttcttcggatGTGGAACTTTTGTTGGGTAAAATCAGAGGGTCTCTTCAAGGTAACACCGACAACCTCGTTTTGTCTTCATGGAATTCCTCGATACCTCTTTGTCAATGGAGGGGACTCAAATGGGTTTTCTCCAATGGCTCTCCTCTTTCATGCAATGACTTGTCCTCTCCACAATGGACCAATCTTTCGCTTTTCAGAGACCCCTCTTTGCGCCTTTTTTCTCTTCAACTTCCTTCTGCTAATCTCTCTGGTTCGCTCCCAAAAGAGATTGCAGAGTTTCCTATGCTTCAGAGTCTCTATCTCAACATCAATTCCTTGAAAGGGACAATCCCTCTTGAGCTTGGGTATAGCTCCTCCCTCTACGATGTCGTTTTGGATGACAATTTGTTGAGTGGAGCTTTACCCCCATCCATATGGAATCTCTGTGATAAGCTTGTTTCTCTTAGACTCCATGGAAATTTGCTTTCTGGGTCTCTTCCTGAACCGGCATTGCCCAACTCTTCTTGCAAGAATCTGCAGATTCTTGATTTGGGTAGCAACAACTTTTCTGGGTCTTTTCCTGAATTCATTACAAATTTTGGTGGGCTCAAACAGCTTGACTTAGGGAATAATATGTTCATGGGTTCAATTCCTCAGAGCTTAGGTGGGTTAAGTAGGCTTGAGAAATTAAATCTTTCACACAACAATTTTAGTGGGGTTTTGCCTACTTTGGGTCAACCATCCAAATTTGGTGTGGAGGTTTTTGAAGGGAATAGCCCTGCCTTGTGTGGGCCACCTTTGGGAAGCTGTAGTGGAACTTCTAGATTGAGTTCTGGTGCAGTAGCTGGTATAGTTATCACTCTTATGACAGGAGCTGTGGTTTTAGCTTCTTTGCTTATTGGATATATGCAAAATAAGAGGAGGAAGGGTAGGGGAGAGAGTGAAGATGAattggaagaagatgaagatgatgaagaaaatgATGGTAGTAATGCTGctattggtggtggtggtggtgaaggGAAGCTTATGTTGTTCCAAGGCGGCGAGAATTTGTCGTTAGACGATGTGTTGAATGCGACGGGGCAAGTTATGGAGAAGACTTGTTATGGGACTGTTTATAAGGCAAAGCTTGCTGATGGAGGGACCATTGCTTTAAGGTTATTGAGAGAAGGTAGCTGCAAGGATAGGGCTTCATGTTTGCCTGTGATTAAGCAGTTGGGAAGGATTCGACATGAAAATTTGATTCCTTTGAGAGCTTTCTAtcaggggaagagaggagagaaGCTCCTCATTTATGACTATCTCCCTCTCAGAACTCTTCATGATCTTTTGCATGAAACCAAAGCAGGAAAACCAGTGCTGAACTGGGCTAGGCGACACAAGATTGCATTGGGTATAGCCCGAGGGCTAGCATATCTTCATACCGGACTAGATGTTCCAATCACTCATGGGAATGTACGATCCAAGAACGTGCTAGTGGACGAGTTCTTTGTTGCCAGGCTCACTGAGTTTGGGCTCGACAAGCTAATGATTCCTGCTGTGGCCGACGAATTGGTGGCACTTGCCAAGACTGATGGCTACAAAGCTCCGGAGCTTCAAAAGATGAAGAAATGCAATTCCTGGACCGATGTTTATGCATTTGGTATCTTACTGTTGGAGATTTTGATAGGGAAGAAACCCGGGAAGAACGGGAGGAGTGGAGAGATTGTGGATTTGCCTTCAATGGTGAAAGTAGCAGTTTTGGAAGAGACAACCATGGAAGTGTTTGATGTGGAGCTTCTGAAAGGGATAAGGAGTCCTATGGAAGATGGGTTGGTGCAGGCATTGAAGCTAGCAATGGGTTGTTGTGCACCGGTGGCTTCAGTTAGACCTAGCATGGAGGAAGTAGTGAGACAGTTGGAGGAGAATAGGCCAAGGAATAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGGAGTGGTACTCCATTTTGA 2067 0.418 MAITKLFSFYIFVCFFFSAVTESLSSSSSSSSSSSSSSDVELLLGKIRGSLQGNTDNLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCNDLSSPQWTNLSLFRDPSLRLFSLQLPSANLSGSLPKEIAEFPMLQSLYLNINSLKGTIPLELGYSSSLYDVVLDDNLLSGALPPSIWNLCDKLVSLRLHGNLLSGSLPEPALPNSSCKNLQILDLGSNNFSGSFPEFITNFGGLKQLDLGNNMFMGSIPQSLGGLSRLEKLNLSHNNFSGVLPTLGQPSKFGVEVFEGNSPALCGPPLGSCSGTSRLSSGAVAGIVITLMTGAVVLASLLIGYMQNKRRKGRGESEDELEEDEDDEENDGSNAAIGGGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCKDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADELVALAKTDGYKAPELQKMKKCNSWTDVYAFGILLLEILIGKKPGKNGRSGEIVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2422 688 Gene3D Phosphorylase Kinase; domain 1 372 464 - -
Sto1g2422 688 ProSiteProfiles Protein kinase domain profile. 388 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2422 688 MobiDBLite consensus disorder prediction 664 688 - -
Sto1g2422 688 Gene3D Ribonuclease Inhibitor 203 303 IPR032675 -
Sto1g2422 688 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 4 688 - -
Sto1g2422 688 Pfam Protein tyrosine and serine/threonine kinase 392 663 IPR001245 GO:0004672|GO:0006468
Sto1g2422 688 Gene3D Transferase(Phosphotransferase) domain 1 466 680 - -
Sto1g2422 688 MobiDBLite consensus disorder prediction 338 366 - -
Sto1g2422 688 MobiDBLite consensus disorder prediction 669 688 - -
Sto1g2422 688 SUPERFAMILY L domain-like 76 287 - -
Sto1g2422 688 Gene3D Ribonuclease Inhibitor 38 202 IPR032675 -
Sto1g2422 688 SUPERFAMILY Protein kinase-like (PK-like) 397 664 IPR011009 -
Sto1g2422 688 Pfam Leucine rich repeat 207 266 IPR001611 GO:0005515
Sto1g2422 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2422 Sto-Chr1 31902811 31905499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2422 10 688 Receptor kinase-like Gene Family AT3G24660 74.118 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto1g2422 PK_Tyr_Ser-Thr 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2422 - - gmx:100814814 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2422 1 31902811 31905499 Sto1g2422 1 31902811 31905499 ECH