Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2419 ATGAATGGTGGATCAGTAGTGGGAGATGTGTTTGAAGAAGAAGCAGCAGTTATGGCGGCGGTtaaggagagagagaggtggCTTCGTGATGTGAAAAATGATGATATGGAAGACGCTTCAATGTTGTTCGCCGATCCTCTTCCTGATTTCCAATGCATGTCCTCTTCTTCGTCGTCGTCTAAATCTAATTACGCCACTGCGTCGATGGAGATCCCACAGCCGTCGGATCAAAGCGGAGGAGGAGATTATTGTATGGACACGATGGACACGTTCGGGTCGATGGAACTTCTGGAGACCAACGATTTCTTCGACCCTTCATCCATCTTTCAAGATTTGGAATTAGCAGAATTAGCAGAGCAGAATTCCAATTATCCATCAGAGATAATAAAGCAGGAGAAAGCGGCGGCAGTGGATGAAGAAATGAGCGGTGTGTTCTTGGAATGGCTGAAGATGAACAAGGAGAGCGTGTCGGCGAGTGAGTTGAGGAGCGTGAGGCTCAAGAAGTCCACCATAGAGTATGCGGCCAAGCGTCTAGGCGGAGGAAAACAGGGGATGAAGCAATTGTTGAAGCTTATTCTCCAATGGCTTCAGACTACCCATCTTCACAATAAACCACGCAAACCTCAAACTCAAAACGACAGtaattttgtcaataatattaatacgACGCCGTTTCAGGGCAAGCCTCCATCAACAACCCCTGTTTCCTTTACCTCTCCCCTGCCCTACCCTGCTGGGTATGTGGGTATGGGTATGGGTGACCCGTTTTCAAATGGAGCTTATTACAATCAAATGAATCAATCATTTGGTGACAGTAATCTCCAGGCGCTGCCACCGCCGCTATACCAGAATCCGTTTCAGTATTTTGAGGGGGAGAATGGAATGAGATCAGGACATTCGGCTACGAAAGAagcgaggaagaagaggatgGCCAGACAAAGACGCCATTTATCTCGTCACAGACATTATCACAATAATGAGGTCACTATTGGCCACCAGAATCAGAATAATAATGGGGATTATTTGCATAttgcaaataataataataataataatccaccCAACTGGTTGTACTGGCCGCCGATGGTGgcggttggtggtggtggtgggcccACTTCTGTTGCGCCGGCTTCGGGGCAAAATGCGGCGGATCGGACCGCCATGCAAAGCCGCCAGAATTATGAGCAAGGCCTGCTGATGTCATCCTCAGATAGGGGACAACAgggatcttcatcatcatcatcatgcaaGCCTGAGGAAAAGAACTTGAGGTTCCTTTTGCAGAAGGTGTTGAAGCAAAGCGATGTGAGTAGTTTGGGGAGGATTGTTTTGCctaagAAAGAGGCAGAAATCCATTTGCCAGAACTGGAGACAAGAGATGGCATTTCTATAGCAATGGAAGACATTGGAATTTCTCGTGTTTGGAATATGCGCTATAGATATTGGCCAAACAACAAAAGCAGGATGTATCTGCTTGAGAATACCGgaGACTTCGTGAGAGCCAATGGGCTCCAAGAAGGAGACTTCATAGTGATATACTCAGATGTGAAGTGTGGCAAATTTATGATACGAGGTGTAAAAGTAAGACTAGCAGGGTTGAAAACGGAGACTAAGAAGGCAGGAAAATCCCAGAAAAACCAGCATGGGAATATTAGTACTGATCAAGCTAATGACTCGCTTTCTTCCTCACCAAACACTGCTCAAACGCAGAAAATCCgtaaattaagttaa 1731 0.4217 MNGGSVVGDVFEEEAAVMAAVKERERWLRDVKNDDMEDASMLFADPLPDFQCMSSSSSSSKSNYATASMEIPQPSDQSGGGDYCMDTMDTFGSMELLETNDFFDPSSIFQDLELAELAEQNSNYPSEIIKQEKAAAVDEEMSGVFLEWLKMNKESVSASELRSVRLKKSTIEYAAKRLGGGKQGMKQLLKLILQWLQTTHLHNKPRKPQTQNDSNFVNNINTTPFQGKPPSTTPVSFTSPLPYPAGYVGMGMGDPFSNGAYYNQMNQSFGDSNLQALPPPLYQNPFQYFEGENGMRSGHSATKEARKKRMARQRRHLSRHRHYHNNEVTIGHQNQNNNGDYLHIANNNNNNNPPNWLYWPPMVAVGGGGGPTSVAPASGQNAADRTAMQSRQNYEQGLLMSSSDRGQQGSSSSSSCKPEEKNLRFLLQKVLKQSDVSSLGRIVLPKKEAEIHLPELETRDGISIAMEDIGISRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKFMIRGVKVRLAGLKTETKKAGKSQKNQHGNISTDQANDSLSSSPNTAQTQKIRKLS 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2419 576 MobiDBLite consensus disorder prediction 544 576 - -
Sto1g2419 576 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 569 - -
Sto1g2419 576 MobiDBLite consensus disorder prediction 61 75 - -
Sto1g2419 576 MobiDBLite consensus disorder prediction 536 576 - -
Sto1g2419 576 CDD BfiI_C_EcoRII_N_B3 425 526 - -
Sto1g2419 576 MobiDBLite consensus disorder prediction 400 420 - -
Sto1g2419 576 SUPERFAMILY DNA-binding pseudobarrel domain 426 522 IPR015300 -
Sto1g2419 576 SMART B3_2 427 527 IPR003340 GO:0003677
Sto1g2419 576 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 569 IPR044800 GO:0003700
Sto1g2419 576 ProSiteProfiles B3 DNA-binding domain profile. 427 529 IPR003340 GO:0003677
Sto1g2419 576 MobiDBLite consensus disorder prediction 61 82 - -
Sto1g2419 576 MobiDBLite consensus disorder prediction 400 419 - -
Sto1g2419 576 Pfam B3 DNA binding domain 428 524 IPR003340 GO:0003677
Sto1g2419 576 Gene3D - 416 531 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2419 Sto-Chr1 31882437 31884656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2419 45 571 B3 DNA Binding Superfamily AT3G24650 42.649 5.42e-116 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sto1g2419 B3 7.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2419 - - gmx:100795226 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2419 1 31882437 31884656 Sto1g2419 1 31882437 31884656 ECH