Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2403 ATGTCCAGAGTAGGTTCATCAAGATGGAGTCCAACCCCAGAGCAGCTAATGATATTGGAGGAACTGTACAGGAGTGGGATTAGAACTCCTACTGCTTCCCAAATTCAACACATAACAACCCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAACCACAAGGCTAGGGATAGGCAGAAGCTTAGGAGGAAACTTAACAAGCAATTCCACCTACAACAGCAACAACTGCTACAACTGAATCAGGATAAGAGTCACTGTTTTTTTGGTGGCTTTGATTCCTCTCATGTTTCTTCTACCCAGCAAATTTCTTTTTATAACTCAGCTTTCTTGCTTTCTCAGggAGATGCTGGAGGCATAGCAGAGAAGGCAACAAATTGCAGATGGAGTAGTGTGCAAAACCCACAATATGTGGTGGAGAAAACAGAGAAGTCATCACTCTGCAACTATGGTTGGAGTCTCATGGATGTTAATGAAGCATCCTCATATTGCACTCCTCGACCTCTCAAGACTCTTGACCTTTTTCCAACCACATCTACCAAACTCAAAGAAGACTGCACAACATTCACCAAGCAACTCTATCATTCTATGTCTGCTAATTTATGA 624 0.4167 MSRVGSSRWSPTPEQLMILEELYRSGIRTPTASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQFHLQQQQLLQLNQDKSHCFFGGFDSSHVSSTQQISFYNSAFLLSQGDAGGIAEKATNCRWSSVQNPQYVVEKTEKSSLCNYGWSLMDVNEASSYCTPRPLKTLDLFPTTSTKLKEDCTTFTKQLYHSMSANL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2403 207 Coils Coil 69 89 - -
Sto1g2403 207 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Sto1g2403 207 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 194 - -
Sto1g2403 207 CDD homeodomain 8 67 IPR001356 GO:0003677
Sto1g2403 207 Gene3D - 2 67 - -
Sto1g2403 207 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Sto1g2403 207 SMART HOX_1 4 71 IPR001356 GO:0003677
Sto1g2403 207 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 194 IPR044555 GO:0003700|GO:0099402
Sto1g2403 207 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2403 Sto-Chr1 31779919 31780730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2403 1 74 Wox Gene Family AT2G28610 83.784 5.53e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sto1g2403 Homeodomain 8.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2403 - - gmx:102663963 229.18