Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2381 atggtTGAGTCAGCCACCTCAGAGACTATGATGGAGGAAGCAGTAATGGGTGGTGCTTATGGGTCAGATGGGTCAGAAGAAGATGAGCTTTTGAGAGAGCTTTTAGATTATAATGGGTCTCCTCTTCTTCCCTTTGAACCCAACACTACTACAACTACTCCTAATTCTTCAACCATTAATACCTTCATCTCCAACATTTACTCAGGACCTACCATTTCTGATATTGAAAATGCCTTATCATTTACCAACCATAGATCAGACCATTCCCAAGACCTCTCCTTATCCAgAGTTTCCATACTGGAGAAAGGGTTGGGTAAGATTGAGAATAAGTATACTCTGAAAATCAAGTGctttggaaatggaatgggtGATGATGGATATAAATGGAGGAAGTATGGACAGAAATCTATTAAGAATAGCCCAAATCCTAGAAGCTACTATAGGTGCACCAACCCAAGATGCAGTGCTAAGAAGCAAGTGGAAAGATCCACTGAAGATCCAGACACTCTTATTATCACCTATGAAGGTCTCCACTTCCACTTTGCTTATCCATATTTGTTCACAAGCCCACCACAACAATCCCTCCCACCAACAAAAAAGCCCAAACCCACCTTCCCACAAGCCCAAACTGAAGCCCAAAACCAGGAATCACAGGAATCCCAACATGTTCATGAAGATCAGCAAACACAAGAATCAGAagaagcccaagcccaagcccaagaaaGCATGGGATCACAAGGTTTGCTTGAAGACATGGTGCCATTGATGATTCGGAACCCTACAATAAGTCACAACAATGGAATCCCAAACTTTTCTTGTTCCTCATACCGTTGTCCTGCAGCATCACCTCCTTCTCTATCTTGGTCATCTAATTACACTGTTGGCTTAGATTCTGGCATTTAA 903 0.3965 MVESATSETMMEEAVMGGAYGSDGSEEDELLRELLDYNGSPLLPFEPNTTTTTPNSSTINTFISNIYSGPTISDIENALSFTNHRSDHSQDLSLSRVSILEKGLGKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSTEDPDTLIITYEGLHFHFAYPYLFTSPPQQSLPPTKKPKPTFPQAQTEAQNQESQESQHVHEDQQTQESEEAQAQAQESMGSQGLLEDMVPLMIRNPTISHNNGIPNFSCSSYRCPAASPPSLSWSSNYTVGLDSGI 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2381 300 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 24 274 - -
Sto1g2381 300 Gene3D WRKY domain 119 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto1g2381 300 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 274 IPR044810 GO:0003700
Sto1g2381 300 SMART WRKY_cls 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g2381 300 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g2381 300 MobiDBLite consensus disorder prediction 190 244 - -
Sto1g2381 300 ProSiteProfiles WRKY domain profile. 118 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g2381 300 SUPERFAMILY WRKY DNA-binding domain 121 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2381 Sto-Chr1 31639561 31642954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2381 54 261 WRKY Transcription Factor Family AT5G43290 44.493 5.30e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto1g2381 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2381 - - gmx:100810459 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2381 1 31639561 31642954 Sto1g2381 1 31639561 31642954 ECH