Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2373 ATGATGAAGATAGACGACGATCTGGGTCCTGATCGTGATCAGGTCGGGTTTGAGACTGACGATGAAGAAAATCAAGCAGACAGAGTTTTTGAACATTTGGGTGACGACACTGAATCTGATATCTCAGAACGCCTTTTGTCCACCCACGACTCTGACGACGTCGTTAATGCCACCTGGCCTCAGAGCTATCGTTTTACTGCTTCAGCACTTTTCAAGAGACCTCATTCAGATGATTCTGCTTTGTCTACAACCCTAATTCCTGGAACAAGCTCTTTTAGAGAAGATGATGACCCTACCTCCACGGGCCGACCCGGCCCATCCCGCCTTTCTAGCTGCTCCAGATCTTCTAGTTATGAACTGCCACCACCACAAGAACAATCTTCATTAGCACAATCAATCCTCAATGGAACCAATATATTATGTGGGATAGGACTTCTTACTACACCATATGCAGTAAAAGAAGGTGGATGGTTGAGCCTTATAATTCTCTTCTTGTTTGCCATCATATGCTGCTATACTGGGATTTTGTTGAAGAGATGTTTAGAAAGCTCTCCGGGACTCGTTACCTACCCGGATATTGGGCAGGCTGCTTTCGGAATAGCCGGTCGCCTAGGGATTGCCGCTGCTTGTTTGGAGTTTATAATACTAATGGGTGATAACCTCTCATCACTTTTTCCCAACACCTACATCACATTTGCTGGGATTTATTTACACAGTCAACAACTTTTTACCATCGTATCAACTCTCTGTATTTTGCCAACTGTTTGCCTACCAAACTTTAccctcctttcctttctttcagCTGGAGGAATAGTTGCATCAATATTGGTCACCTCTTGCTTGGTATGGGTGGGTGTGATAGACAAAGTTGGATTCCATCCAACTGGAAAACCATTAAACCTTGCAAACATATCTGTCTCACTTGGTCTCTACAGTTTTGGATTCTCTGGCCACTCTGTTTTTCCAAACATTTACTCTTCCATGAAGGAAAAGTCAAAGTTTCCAACAGTACTAGTAACCAGcttttgcttttgttttgttCTGTACATAGGAGTAGCAGTATTGGGCTATTTAACGTTTGGTGACTCAGTTGAATCTCAGTTTACCTTAAATATGCCTAAAGATTTAATTGCTTCCAAAATTGCAGCCTGGACAACTGTTGTGAACCCTTTGGCAAAGTATGCCATGACGTTAATGCCTGTTGCAATGAGCATAGAGGAACTCTTACCTGCTTCTAATCAAAGATCTTATTCTATGTCAATTCTTATCAGAATAGTTTTAGTATTCTCAAACTTGGTTTTGGCCCTCTCTGTTCCTTTTTTTGGAGCTATTATGGCATTGATTGGCTCTTCATTGGCAATGCTAGTTGCACTTATTTACCCTTGTGCATGTTATCTCAAGCTGCACCAAGGAAGACTATCAAAATTGCAGGTAGCAAACTGcattttgattattattgtaGGGGTGGTGTGCTCTATAATTGGcacatattcatcagtttcaaGAATAGTAGGGAAGACTGATTGA 1527 0.4008 MMKIDDDLGPDRDQVGFETDDEENQADRVFEHLGDDTESDISERLLSTHDSDDVVNATWPQSYRFTASALFKRPHSDDSALSTTLIPGTSSFREDDDPTSTGRPGPSRLSSCSRSSSYELPPPQEQSSLAQSILNGTNILCGIGLLTTPYAVKEGGWLSLIILFLFAIICCYTGILLKRCLESSPGLVTYPDIGQAAFGIAGRLGIAAACLEFIILMGDNLSSLFPNTYITFAGIYLHSQQLFTIVSTLCILPTVCLPNFTLLSFLSAGGIVASILVTSCLVWVGVIDKVGFHPTGKPLNLANISVSLGLYSFGFSGHSVFPNIYSSMKEKSKFPTVLVTSFCFCFVLYIGVAVLGYLTFGDSVESQFTLNMPKDLIASKIAAWTTVVNPLAKYAMTLMPVAMSIEELLPASNQRSYSMSILIRIVLVFSNLVLALSVPFFGAIMALIGSSLAMLVALIYPCACYLKLHQGRLSKLQVANCILIIIVGVVCSIIGTYSSVSRIVGKTD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2373 508 MobiDBLite consensus disorder prediction 77 95 - -
Sto1g2373 508 PANTHER AMINO ACID TRANSPORTER AVT1D 49 503 - -
Sto1g2373 508 MobiDBLite consensus disorder prediction 1 52 - -
Sto1g2373 508 PANTHER OS05G0424000 PROTEIN-RELATED 49 503 - -
Sto1g2373 508 MobiDBLite consensus disorder prediction 77 124 - -
Sto1g2373 508 Pfam Transmembrane amino acid transporter protein 126 499 IPR013057 -
Sto1g2373 508 MobiDBLite consensus disorder prediction 103 124 - -
Sto1g2373 508 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2373 Sto-Chr1 31594120 31597331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2373 2 506 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.101 6.59e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2373 K15015 - qsu:112025453 580.482