Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2370 ATGAGGATGAAGCTTACGCTGATGGTGCTTTTGATGGTTATAAACTTAGTGGTAGTGATGAGTAGTGAAGATACAAGTTTCATCTACAATGGATTCCATTCAGCTAATTTAACCATAGATGGTATTTCTTCAATCACCCCCAATGGCCTACTTCGTCTCACCAATGATACCAAACTCGGAAAAGGTCATGCTTTCTACCCTAACCCAATACTTCTCACAAACACTTCTTCTTTCTCTACCACTTTCGTTTTCGCCATTCAATCTGAATTTCCCAATTACGCTGGTCATGGAATCGCTTTTCTTATGTCTCCAACAAAAGCCCTTccttttgctttatccactcaGTACTTAGGCCTCTTCAACGAAACCAACAACGGCGACCCCACCAACCAAATTTTCGCTGTAGAACTCGACACCATCCAGAGCACTGATTTCTCAGACATCAACGACAATCATGTCGGAATCGACATTAATGACTTGAAGTCAGCGAATTCTACTCCTGCTGGATATTATTACAGAGATGACGGAATTGGGTTTCGGTTTCAGAATTTGAGCCTTATCAGTGGCCTTCCTATGCAGGTGTGGGTGGACTATGATGgggaaaataaacaaattactGTCACCTTAGCTCTTATCAATGTCATCAAACCAGAAACCCCATTGTTAACGTTGTCCCAAGATCTTTCTCTGATTCTAAGCAATCCCATTTATGTGGGATTCTCGTCTTCCACTGGCTCAGTCTTCTTGACATCTCATTATGTTCTTGGTTGGAGCTTCAAAGTCAATGGGGTGGCTCAAAACCTCGTAATTTCACAACTGCCAGAGCTACCTCGGCTAGGTAGAAAAAAACAATCTTTGATTTTGCCGATTGGGTTACCTCTGTTTTCTCTCTGTTTCATTGTTGTGGTGAGTTTGGTTGTAGTTTATTTCATAATGAGGAAGAGAAAATTCTCTGAGGTTCTAGAAGATTGGGAGCGAGACTATGGTCCTCACAGGTTCAAATACAAAGATCTCTACTTTGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTTGGTAGTGGTGGATTTGGTACTGTGTACAAAGGCACAATGCCAACTTCGAAAATAGAAATTGCCGTGAAAAGAGTGTCCCATGAATCCCGACAAGGTATGAGAGAATTCGTAGCAGAAATCGTTAGTATTGGTCGTCTTCGCCACCGAAATATTGTTCCGCTTTTGGGATATTGCAGGCGTAAAAGAGAGCTTCTTTTGGTCTACGATTTCATGCCAAATGGAAGCTTAGACAAATACCTCCATAACCAACCTAGTGTGACACTAAATTGGAGACAAAGATTCCATATCATCAAAGGGGTAGCTTCGGGATTGTGCTATTTACACGAAGAATGGGAGCAAGTGGTGGTTCATAGAGACATAAAAGCAAGCAATATTCTTCTAGATTCAGAACTAAATGGAAGGATAGGAGATTTTGGTCTTGCGAGATTATACGACCATGGGAGTGATCCTGAAACAACACGTGTGGTGGGGACACTTGGGTATCTGGCACCAGAACAGACAAGAACAGGAAGAGCCACGACCATGTCCGATGTTTTTGCTTTTGGTGCCTTTATGCTTGAGGTGGTGTGTGGAAGAAGGCCTATACAACAAGAAGAGGGTataaacgacgtcattttggtgGATTGGGTTTATGGTTGTTTCACTAGAGGTGAGATCGTTGCAGCAAAGGATGAGAATTTGGAATTGGGAATAGAGTATAAGGAAGAGGAGGTGGAGTTGGTGTTGAAACTTGGACTTCTGTGTTCAAATTCAGAACCTTCCAGAAGGCCAAGCATGCGTCAAGTTGTGCAGTATTTGAAATTGGATTTGCCTTTGCCTGATCTCTCTCCACTATGCTTATCTTCTTCAGGGTTAACGTTTGGGCATCCTCATCATCACTTTCCTGACTCTGCAATGTCCTTTCCTTCTATGAATTGGTCAGTATCTCAATATTCTGATGCTGAATCGTTTCTCTCTGGAGGTCGTTGA 2022 0.4125 MRMKLTLMVLLMVINLVVVMSSEDTSFIYNGFHSANLTIDGISSITPNGLLRLTNDTKLGKGHAFYPNPILLTNTSSFSTTFVFAIQSEFPNYAGHGIAFLMSPTKALPFALSTQYLGLFNETNNGDPTNQIFAVELDTIQSTDFSDINDNHVGIDINDLKSANSTPAGYYYRDDGIGFRFQNLSLISGLPMQVWVDYDGENKQITVTLALINVIKPETPLLTLSQDLSLILSNPIYVGFSSSTGSVFLTSHYVLGWSFKVNGVAQNLVISQLPELPRLGRKKQSLILPIGLPLFSLCFIVVVSLVVVYFIMRKRKFSEVLEDWERDYGPHRFKYKDLYFATKGFREKELLGSGGFGTVYKGTMPTSKIEIAVKRVSHESRQGMREFVAEIVSIGRLRHRNIVPLLGYCRRKRELLLVYDFMPNGSLDKYLHNQPSVTLNWRQRFHIIKGVASGLCYLHEEWEQVVVHRDIKASNILLDSELNGRIGDFGLARLYDHGSDPETTRVVGTLGYLAPEQTRTGRATTMSDVFAFGAFMLEVVCGRRPIQQEEGINDVILVDWVYGCFTRGEIVAAKDENLELGIEYKEEEVELVLKLGLLCSNSEPSRRPSMRQVVQYLKLDLPLPDLSPLCLSSSGLTFGHPHHHFPDSAMSFPSMNWSVSQYSDAESFLSGGR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2370 673 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Sto1g2370 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
Sto1g2370 673 CDD STKc_IRAK 351 616 - -
Sto1g2370 673 Pfam Legume lectin domain 25 273 IPR001220 GO:0030246
Sto1g2370 673 PANTHER - 8 659 - -
Sto1g2370 673 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 8 659 - -
Sto1g2370 673 SUPERFAMILY Protein kinase-like (PK-like) 327 636 IPR011009 -
Sto1g2370 673 Gene3D Phosphorylase Kinase; domain 1 330 421 - -
Sto1g2370 673 Gene3D - 23 272 - -
Sto1g2370 673 SMART serkin_6 345 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2370 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Sto1g2370 673 Pfam Protein kinase domain 345 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2370 673 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Sto1g2370 673 Gene3D Transferase(Phosphotransferase) domain 1 422 626 - -
Sto1g2370 673 ProSiteProfiles Protein kinase domain profile. 345 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2370 Sto-Chr1 31578543 31585293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2370 21 673 Receptor kinase-like Gene Family AT2G37710 61.991 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g2370 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2370 - - adu:107484540 879.396