Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2368 ATGGCGTCTCCCTTCAACCTCCTTCTCATGATCTTGCTTTCGCTGGTGGCATCAAGTGCAGAAGAAAacacaagcttcatcttcaaTAATGGCTTCTTCCAATCCTCCAATTTAACCATGGATGGTGTTTCTTCCTTCACTTCCAATGGCCTCCTCCAACTCACCAACGccacaaaacaacaaaaagcTCATGCTTTCTTCCCCAACCCAATACATTTCACAAACCCTTCtaattctttctcttcttctttcgtTTTCGCCATTAGATCTGAATACCCCACTCTCAGTGGTCACGGAATCGCTTTCCTTATCTCTCCCACAAAAGCACTTCCTGGTGCTTTACCCAGTCAGTTCTTGGGCCTCTTCAACGAGACCACCAATGGCAGCcacgaaaatcatgtttttgctGTAGAACTCGACACCATCCAGAACAGTGAGTTCGAGGATATCAACGATAACCATGTCGGAATCAACATTAATGGCTTGAAGTCCGTGAAATCTGCTCCTGCAGGGTATTACAGAGATGGGTTTCAGTTTCAGAATTTGAGCCTCATGAGTGGATTTCCTATGCAAGTGTGGGTGGAATATGACGGAGGTAAGAAGGGAATTAGTGTCACATTAGCTCCAATTAATGTTAATAAACCAGAAACTCCATTATTAACGTTGTCTCAAGATCTCTCTTTGATTCTAAGCAATCCCTTTTATGTCGGATTCTCATCTTCCACTGGCTCTGTCTTAACTTGTCATTATGTTCTGGGTTGGAGCTTCAAGCTCAATGGGGAGGCTGAAAACCTCGTCATCTCCGAACTGCCTGGATTACCAGAATTAGGTGGTGAAAACGAAGAATCTATGGTTTTGTTTATTGGGTTGCCTCTGCTTTCACTCTGTTTAATCTTTCTGGTGAGTTTAGCTGTATTTCATTTTATAAAGAGGAAGAGGAAATTTTCGGAGCTGCTTGAAGATTGGGAGCAAGACTACGGTCCTCACAGGTTCAAATACAAAGATCTCTACTTTGCCACAAAGGGGTTTCAAGAGAAGGAGCTTCTGGGTAGTGGTGGATTTGGAAGAGTGTACAAAGGGACAATGCCAATTTCGAAAATTGAGGTTGCCGTGAAACGAGTGTCCCACGAATCCCGACAAGGCATGAGGGAATTCGTCGCAGAAATCGTTAGTATCGGTCGTCTTCGCCACCGAAACCTCGTACCTCTTCTGGGATATTGCAGGCGAAAAGGGGAGCTTCTTTTGGTCTACGATTTCATGCCAAACGGAAGCTTAGACAAATACCTCTATAACCAACCCAGAGTGACACTAAATTGGACACAACGATTTCGAATCATAAAAGGGGTAGCTTCGGGATTGTGCTATTTACACGAAGAATGGGAGCAAGTGGTGGTTCATAGAGACATAAAAGCAAGCAATATTCTCCTAGATTCAGAACTAAACGGAAGATTAGGAGATTTTGGTCTCGCGAGATTATACGACCATGGGAGCGATCCTCAAACCACGCATGTGGTGGGGACATTGGGGTATCTGGCGCCAGAACAGACAAGAACAGGGAAAGCCACCACGAGTTCTGACGTTTTTGCTTTTGGTGCGTTTATGCTTGAGGTAGTGTGTGGAAGAAGGCCCATAGAGCAAGGGGGAGGAAGTGACGGCGTCGTTTTGGTGGATTGGGTTTATGGGTTTTTCAATAGAGGGGAGATTGTGGAAGCGAAGGATGAGAATTTGGGTATGGGAAGAGAGTATAGGGAAGAGGAGGTGGAGTTGGTGTTGAAACTTGGGCTTTTGTGTTCCAATTCGGAGGCTTCGAGAAGGCCCAGAATGCGTCAAGTGGTGCAGTATTTGAATGGGGATGTGGCTTTGCCTGATATGTCTTCGTTAAGCTTGTCGTCATGTTCAGGATTAAGGCTTGGGCATCGTCAAGATCACCATGACTCTGCCATGTCCTATCCTTCTTCAATGGATGTTTCAGAAATGCCTGTGAGAGTATTGGAGAGCTCAACTCCTTCTCAGGTTTCAGGTGCAAATTCAGGTCAGACTTCATTCCAAGCTTGTACACTTCTAAGCGTTGGGCAGGCCTTCTCCGGTACCCAGAATGTTTCTAGCCTACAAAAGGATGAAGCATGGAGAGTAAATGTGCGTATACAAGGATGTGACCTTGAGCATGGGTATCTATGTGGCACCATGGAAGCTCTGAATGTTCCTATGGCAGACACACCTGTAGTAACATTCTGGGAAGGGGAGATTGTTGATACCAAGAACTATACTTTCTTCACTGGAAAATGGGAAGCAACACCAGAGGACGATTTAAGGCACTGGATTAAGTTTCCATCTTTTTCTCCTCTCATGGCCCAAGTGGAGGCCGACGGTGGCAAGTCTTTGGACCTGAGCAACTATCCTTACATTTTTATGAGATGGAAAGAGCAGTACTTTGTGAATGTTGGAACAGACTGTGGGTTAACGATTGCTGGCTTTTACTATGTCTGTTTTTCTTGCAGTGATGGTTCTATCAGTGGATTCTATTATGATCCCAATAGCAGCCCTTTTCAGAAGCTTGAGCTGAAATCCACAAATGATGGGAGGGCTAAAGCTGAAGAAGCAGTGGTGGATGGTTCTGGAACAAGGCAAGCCATGGCTGCTTCTACTTCATCCACTCTACTATCATCCTCTTTTCTTCCATCAACATTAACTTCTCCGAACAAGCACCATCTCTTCATCCTCCCAAATTCTGCCAAATCTCACCACAACTATCGTCTTTCCTTCAAAGTGCAAGCAGTGAAGCCTCCTCCTGGTGTGGAATTGCCAAAAGTAGTGCCACAATTTAAACCTCCATTTCTTGGATTTACCAAGACAGCAGAAATATGGAACTCCAGAGCTTGCATGATTGGACTCATTGGAACTTTCATTGTGGAATTGATACTAAACAAAGGAATACTTCAGGTTATTGGAGTTGATGTTGGGAAAGGTCTAGATCTTCCTCTCTAA 2985 0.4362 MASPFNLLLMILLSLVASSAEENTSFIFNNGFFQSSNLTMDGVSSFTSNGLLQLTNATKQQKAHAFFPNPIHFTNPSNSFSSSFVFAIRSEYPTLSGHGIAFLISPTKALPGALPSQFLGLFNETTNGSHENHVFAVELDTIQNSEFEDINDNHVGININGLKSVKSAPAGYYRDGFQFQNLSLMSGFPMQVWVEYDGGKKGISVTLAPINVNKPETPLLTLSQDLSLILSNPFYVGFSSSTGSVLTCHYVLGWSFKLNGEAENLVISELPGLPELGGENEESMVLFIGLPLLSLCLIFLVSLAVFHFIKRKRKFSELLEDWEQDYGPHRFKYKDLYFATKGFQEKELLGSGGFGRVYKGTMPISKIEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPRVTLNWTQRFRIIKGVASGLCYLHEEWEQVVVHRDIKASNILLDSELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEQTRTGKATTSSDVFAFGAFMLEVVCGRRPIEQGGGSDGVVLVDWVYGFFNRGEIVEAKDENLGMGREYREEEVELVLKLGLLCSNSEASRRPRMRQVVQYLNGDVALPDMSSLSLSSCSGLRLGHRQDHHDSAMSYPSSMDVSEMPVRVLESSTPSQVSGANSGQTSFQACTLLSVGQAFSGTQNVSSLQKDEAWRVNVRIQGCDLEHGYLCGTMEALNVPMADTPVVTFWEGEIVDTKNYTFFTGKWEATPEDDLRHWIKFPSFSPLMAQVEADGGKSLDLSNYPYIFMRWKEQYFVNVGTDCGLTIAGFYYVCFSCSDGSISGFYYDPNSSPFQKLELKSTNDGRAKAEEAVVDGSGTRQAMAASTSSTLLSSSFLPSTLTSPNKHHLFILPNSAKSHHNYRLSFKVQAVKPPPGVELPKVVPQFKPPFLGFTKTAEIWNSRACMIGLIGTFIVELILNKGILQVIGVDVGKGLDLPL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2368 994 SUPERFAMILY Protein kinase-like (PK-like) 324 628 IPR011009 -
Sto1g2368 994 Pfam Protein kinase domain 343 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2368 994 Pfam Vacuolar import and degradation protein 688 856 IPR018618 -
Sto1g2368 994 Gene3D - 22 269 - -
Sto1g2368 994 PANTHER - 6 648 - -
Sto1g2368 994 Pfam Legume lectin domain 24 269 IPR001220 GO:0030246
Sto1g2368 994 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 275 IPR013320 -
Sto1g2368 994 SMART serkin_6 343 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2368 994 SUPERFAMILY Chlorophyll a-b binding protein 936 984 - -
Sto1g2368 994 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2368 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Sto1g2368 994 Gene3D Transferase(Phosphotransferase) domain 1 420 630 - -
Sto1g2368 994 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Sto1g2368 994 CDD STKc_IRAK 349 617 - -
Sto1g2368 994 CDD lectin_legume_LecRK_Arcelin_ConA 24 260 IPR001220 GO:0030246
Sto1g2368 994 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 6 648 - -
Sto1g2368 994 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2368 Sto-Chr1 31566580 31574815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2368 19 654 Receptor kinase-like Gene Family AT2G37710 62.402 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g2368 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2368 - - gmx:100802293 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2368 1 31566580 31574815 Sto1g2368 1 31566580 31574815 ECH