Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2362 ATGGAAACCATGTCTATAAAGCAGTTGTTGAAGAGCCTTTGTCATTATACACAGTGGAACTATGTTGTGTTTTGGAAGCTTAATCACTATCTTCCAATgAGTTTGAGCTGGGAAGATGGATACTGTAATTACCAGAAAGAAAACGAGGCTGTGGAAAGCATGCACTGTGACATTACTTTTGAAGACTCAAATGACCTGTTTTCTTCAAGTATTGAAAGTAACGGTGCTTCTGAAGCTTTTTCACTTCGTCTTCTCATGACTGAAATGTCTAATCTGAAGTACAGTTTGGGAGAGGGGATTGTTGGAAAAATAGCTCTTAAAGGTGAGCATTGTTGGGTTTTCTCTGAGGATATCTTTACAAGTAACTTCAACACTGACTTAATCTCTGAGTGTCCTTATGAATGGCTTCTTCAATTTTCATCAGGCATAAAGGCTGTTTTGCTTGTACCAGTTCTACCACATGGAGTTTTGCAATTTGGTTCATTTCAAGCGGTTGCTAAGGATATGGAATTTGTTACCAATGTCAAGGAGAAATTCAGTTCTCTTTATTGTAAGCTAGCAAGTGATACACTTTCAAGCTCAGATATTGCGATTCAATCGTCATCCTTCTCAGCTCCAACCGATCGCCTTATGGATAACTTGGATgaatcatcttctatttcaaataataaattgaaagcTAAACTTTCTGGTAACACTTCACTCGACATTAATGGATCAACAAGGTTATATCCAATGGTGCCATCATGTATTCAGGATGAGTGTCACACGTATGGGAAAGTTCAGCTGGAATctctcaaaaaagaaaaaagtgagaACATTTCTCCCTACATTGGGGTTTTGAGTGATCCAAGGCACATTGGTCCGGTGGACATGATATTAAACCAAATGGAAAACAGAATATGCTCTTACTCTATCAAAGACATGACAGAACAACAATTTGGAAGCGCAGGCACTGGTCATAAAAATTGTCAAGATGTTGATAGCTTATTCGAGTTTTCCTTGGATTCTGAATTATACAGAGCACTTGGACCCGATGCTAGTGGACAGACTGCTGAATCTCTCAAGGAAGGTGATGCAGAATATCTATTGGATGCTGTTGTTCGCAGCTTAGATACCTCATTCAGTATAACCAACGGTGTTATGCCTCATATAACATTGCCAAGAGAATATACTGCTTTGATTCCTCCGCAAAGTCGTTCTGAAGAAAGCACTTTGATAGTGGATTATTCAGAACCTGAAAACCATCTTACTCCTACATTTATGGTTGAGGGCAGAGATGATTTTAGTAACCTTGTTTCATCAACATCTTCTGATGGCAATTCAAGCATATTGATTGATGAGACACAGCAGAAGGTTAATGGTAATACGCAGCCTGACATCAGACATAAGCTTTCTTGTATCGGCAAGAAAAGAGGTAGAGTTGGTAATACCGAAAAGCCAAGACCAAGAGATAGACAGTTGATCATGGACAGGATGAAGGAGTTAAGGGAACTCATACCGGATGGTGCCAGATGTAGCATTGACAACCTCTTAGATCGAACGGTAAAGCACATGCTGTACTTACAGAATATCACAAAGCAGGCTGAGAAATTGAAACAATGTCTGCTTCAGGAGGTTCCTGATTGCAAGAAACAGAAAATCAATGGCAGCCATGCCGGACGTACCTGTGCGTTTGACTTGGAAAGTGAACACCAAGTATGCCCTTTAATCGTCGAAGATCTCGGATGCTCAGGGAACTTGCTTATAGAGATGATATGCAGTGAGGCAGCACTTTTCTTGGAGATTGTGAGTGTGATCCAAAGGATGGAGCTTACCATCATGAAAGGAGTTTTAGAAAGCCGTTCAAGCACCTATTGGGCTAGTTTCATTGTTGAGGTTCCAAGAGGATTTCACAGAATGGACATTCTGTGTCCTTTGTTGCATCTTTTGCAGCTTAGAACAAACCCTAACTCTGCATCAAATACAAGTTGA 1974 0.3926 METMSIKQLLKSLCHYTQWNYVVFWKLNHYLPMSLSWEDGYCNYQKENEAVESMHCDITFEDSNDLFSSSIESNGASEAFSLRLLMTEMSNLKYSLGEGIVGKIALKGEHCWVFSEDIFTSNFNTDLISECPYEWLLQFSSGIKAVLLVPVLPHGVLQFGSFQAVAKDMEFVTNVKEKFSSLYCKLASDTLSSSDIAIQSSSFSAPTDRLMDNLDESSSISNNKLKAKLSGNTSLDINGSTRLYPMVPSCIQDECHTYGKVQLESLKKEKSENISPYIGVLSDPRHIGPVDMILNQMENRICSYSIKDMTEQQFGSAGTGHKNCQDVDSLFEFSLDSELYRALGPDASGQTAESLKEGDAEYLLDAVVRSLDTSFSITNGVMPHITLPREYTALIPPQSRSEESTLIVDYSEPENHLTPTFMVEGRDDFSNLVSSTSSDGNSSILIDETQQKVNGNTQPDIRHKLSCIGKKRGRVGNTEKPRPRDRQLIMDRMKELRELIPDGARCSIDNLLDRTVKHMLYLQNITKQAEKLKQCLLQEVPDCKKQKINGSHAGRTCAFDLESEHQVCPLIVEDLGCSGNLLIEMICSEAALFLEIVSVIQRMELTIMKGVLESRSSTYWASFIVEVPRGFHRMDILCPLLHLLQLRTNPNSASNTS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2362 657 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 652 - -
Sto1g2362 657 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 473 522 IPR011598 GO:0046983
Sto1g2362 657 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 652 IPR043561 GO:0003700|GO:0006355
Sto1g2362 657 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 179 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2362 Sto-Chr1 31509668 31512894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2362 470 645 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 46.591 1.49e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2362 - - lang:109360470 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2362 1 31509668 31512894 Sto1g2362 1 31509668 31512894 ECH