Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto1g2360 | atgaagaatctGATACTGACTCACTTGTTCTTTCttctcctctctttctcttctccattACTCATCATTGCTTCCTTCACTCACTGCCCAAACTGTGGTCCCACCCACGTCCCCTACCCTCTGAGCACCCACCCCCATTGCGGACACCCCTCCTACAAGCTCCGTTGCGAGGGACACTCCCTCTGGTTCGACACCCTCAACTCCTCCTCCTACCTCGTCACCTCCATCAACCCCAAAACGCAGCGTTTCGTGGTCCGACCCCCCGGTCTCTCCTCCAAACGAACCTGTGTCTCCTCCGACTTCCAAGCCCAAGGCATGTGGCTCGACCCAAACGCACCCTTTAACATCACCTCATCCAACACCATCATCCTCATGAACTGCTCCCAACAAGTCCTCTCCCTCTTGTGGAACTGCTCTTCTTCCAGCATTTGTCATCACTACCTTCAGTCCAATGCCGGCGCTGCCACTGCATGTGGCGCTGGTGGAACCGCCTTATGCTGCGCAATCAAGACCGGGGGTTCAACCACCGCGTATCGGATCAGGGTGAGGAAGGAGCGGTGCGCCGCCTATGTGAGTTTTCCCAATTTGGATGATTATTCGACGCCGGTGAGAGAGTGGCCGGAGCCCGGGGTGGAGATTGAGTGGGTGCTTCCGGAGGAGCCGGCATGTGATGCGGCTGTGGATTGTCGGGGTTTGGCAAACTCGGCGTGCTTGACGGCTCCGGCGGTCGGAGGTGGCGGAGAGATCAAGTGTGAAGATGGAAGGGGATGTAAGCATCGTAAGAAGAAAATTCAACTTATTGGAGGTTTGGCATTTGCCGGGGCTGCCCTACTCGCTGGAACCCTAATCGTAGCACTAATTTTGCACCGCCGCCGCCGCAACACTGAGCGGAGTCTAGGAGCGGAGCTAAGCTTAAGCAGGGCACGTGACATCCTTGAGGGCGACAACAGCAGCGGAAAATCCGCGAAGATCTTCACCATCAAGGAGATGACGAGAGCCACATCTAAATTCTCGAAGCACAACCTCGTGGGCTCCGGCGGCTTCGGCGAGGTCTTCAAGGGTACCCTGGACGACGGCACCCTAACGGCCATCAAACGCGCCAAGCCGGGCAACACACGCGCCGCCGACCAGCTCCTGAACGAGGTCCGAATCCTCTGCCAGCTCAACCACCGCAGCCTCGTACGGCTCCTAGGTTGCTGCATCGACCTCCCCAACGAACCCCTCCTCGTCTACGAGTTCGTCCCAAACGGCACACTCTTCGACCACCTGCACAACGCCAGCGCGTGGGCCCCACTCTCGTGGCATCGACGGCTGAAAATCGCCCATCAAACGGCGGAGGGGCTCTCATACCTTCACAACTCAGCTATACCTAGAATCTTCCACAGGGACATAAAGAGTAGCAACATTTTACTAGACGACAACCTTGACGCGAAGGTTTCGGATTTCGGGCTCTCGAGGTTGGCCATAAGCGAAGCAAGTCACATCACCACGTGTGCGCAAGGGACATTAGGGTACCTGGATCCGGAGTACTACATAAATTTTCAGCTTACGGATAAGAGTGACGTGTACAGTTTTGGGGTGGTATTGTTGGAGATTTTGACATCGAAGAAGgctttggattttgggagggaAGAGGAGGATGTGAATTTGGTGGTGTTTGTGAAGAGGGCTATGAAACATGGGAGGTTGATGGATGTGGTTGATCGGACGGTCAGGATTGGGGCTGGCAGGGTGGAGTTGGAGAGTATGAAGGCATTGGGGAGTCTTGCGGCTTCGTGTTTGGATGAACAAAGACAGAAAAGGCCTTCCATCAAAGATGTTGCCGATGAGATTCACTACATTCTTCGCATGCTTTCTGATCGATAA | 1866 | 0.5364 | MKNLILTHLFFLLLSFSSPLLIIASFTHCPNCGPTHVPYPLSTHPHCGHPSYKLRCEGHSLWFDTLNSSSYLVTSINPKTQRFVVRPPGLSSKRTCVSSDFQAQGMWLDPNAPFNITSSNTIILMNCSQQVLSLLWNCSSSSICHHYLQSNAGAATACGAGGTALCCAIKTGGSTTAYRIRVRKERCAAYVSFPNLDDYSTPVREWPEPGVEIEWVLPEEPACDAAVDCRGLANSACLTAPAVGGGGEIKCEDGRGCKHRKKKIQLIGGLAFAGAALLAGTLIVALILHRRRRNTERSLGAELSLSRARDILEGDNSSGKSAKIFTIKEMTRATSKFSKHNLVGSGGFGEVFKGTLDDGTLTAIKRAKPGNTRAADQLLNEVRILCQLNHRSLVRLLGCCIDLPNEPLLVYEFVPNGTLFDHLHNASAWAPLSWHRRLKIAHQTAEGLSYLHNSAIPRIFHRDIKSSNILLDDNLDAKVSDFGLSRLAISEASHITTCAQGTLGYLDPEYYINFQLTDKSDVYSFGVVLLEILTSKKALDFGREEEDVNLVVFVKRAMKHGRLMDVVDRTVRIGAGRVELESMKALGSLAASCLDEQRQKRPSIKDVADEIHYILRMLSDR | 621 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto1g2360 | 621 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 620 | - | - | |
Sto1g2360 | 621 | Gene3D | Phosphorylase Kinase; domain 1 | 310 | 413 | - | - | |
Sto1g2360 | 621 | Pfam | Protein tyrosine and serine/threonine kinase | 340 | 610 | IPR001245 | GO:0004672|GO:0006468 | |
Sto1g2360 | 621 | CDD | STKc_IRAK | 343 | 611 | - | - | |
Sto1g2360 | 621 | Pfam | Wall-associated receptor kinase galacturonan-binding | 29 | 85 | IPR025287 | GO:0030247 | |
Sto1g2360 | 621 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 28 | 617 | IPR045274 | GO:0007166 | |
Sto1g2360 | 621 | SUPERFAMILY | Protein kinase-like (PK-like) | 320 | 614 | IPR011009 | - | |
Sto1g2360 | 621 | ProSitePatterns | Protein kinases ATP-binding region signature. | 343 | 365 | IPR017441 | GO:0005524 | |
Sto1g2360 | 621 | SMART | serkin_6 | 337 | 614 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g2360 | 621 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 459 | 471 | IPR008271 | GO:0004672|GO:0006468 | |
Sto1g2360 | 621 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 | 28 | 617 | - | - | |
Sto1g2360 | 621 | ProSiteProfiles | Protein kinase domain profile. | 337 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto1g2360 | Sto-Chr1 | 31488707 | 31492753 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto1g2360 | 23 | 621 | Receptor kinase-like Gene Family | AT5G02070 | 52.006 | 0.0 | 635 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Sto1g2360 | PK_Tyr_Ser-Thr | 1.6e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto1g2360 | - | - | gmx:100775709 | 773.852 |