Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2356 ATGGCTTCGTCCCGCATTCATTTTTCAGTTAATCCCCATTTTCCGCACGATTTGCCGCGTATTTCTTCCACATGTCAacttcaattccaatttcaaacttcaAATCCCTCTCACCTCTCATTTACTGCTCTCATACCTTCTCCCTTGTCCAAAACCAGAAAGATCTCCTCTCCCGCCGCTCGGCGCCGTAGCTGTGGTGCTGCGAGGTCTCACATGACCATGGAGGAGAAGCCAATTTCTGGGGATAAAATGCTGGTTTATGTGCCTCCACATCCGTTAATCAAGCACTGGGTTTCAGTTCTGAGGAATGAACAGACTCCTTGTCCTATCTTTAGAAATGCGATGGCTGAGTTGGGAAGGCTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCAACTGTTGCTGGAGAGATTCAGTCACCAATGGGTGTTGCCTCAGTAGAGTTCATAGATCCGAGAGAGCCTGTGGCTGTAGTTCCAATCTTGAGAGCTGGTCTTGCTCTTGCAGAACATGCATCATCAATTTTGCCTGCAACAAAAACATATCATCTAGGAGTAAGCAGAGACGAGGAAACGCTTCAGCCAACAGTATATCTGAACAAGTTACCTGACAAGTTTCCAGAAGGATCTAAAGTATTTGTGGTTGATCCAATGCTGGCAACAGGTGGAACTATAGTGGCTGCAATCACGCTCTTAAAGGAACGGGGAATTAGCAACAAGCAGATTAAAGTGATATCTGCTGTCTCTGCCCCTCCAGCCCTCCAAAAGCTGAGTGAGCAGTTCCCTGGCCTTCATGTGTATACTGGAATTATTGATCCTACAGTCAATGACAAAGGGTTCATAATTCCTGGACTTGGAGATGCTGGGGATCGCAGCTATGGTACATAA 888 0.4527 MASSRIHFSVNPHFPHDLPRISSTCQLQFQFQTSNPSHLSFTALIPSPLSKTRKISSPAARRRSCGAARSHMTMEEKPISGDKMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVAGEIQSPMGVASVEFIDPREPVAVVPILRAGLALAEHASSILPATKTYHLGVSRDEETLQPTVYLNKLPDKFPEGSKVFVVDPMLATGGTIVAAITLLKERGISNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPTVNDKGFIIPGLGDAGDRSYGT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2356 295 CDD PRTases_typeI 151 271 IPR000836 -
Sto1g2356 295 PANTHER URIDINE KINASE 47 291 - -
Sto1g2356 295 TIGRFAM upp: uracil phosphoribosyltransferase 86 295 IPR005765 GO:0004845|GO:0006223
Sto1g2356 295 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 47 291 - -
Sto1g2356 295 Pfam Uracil phosphoribosyltransferase 88 295 - -
Sto1g2356 295 Gene3D - 76 295 IPR029057 -
Sto1g2356 295 SUPERFAMILY PRTase-like 86 294 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2356 Sto-Chr1 31448253 31452291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2356 35 295 PRT Gene Family AT3G53900 72.624 3.54e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2356 K00761 - gmx:100797953 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2356 1 31448253 31452291 Sto1g2356 1 31448253 31452291 ECH