Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2310 ATGATAGTTGATATGGACTTGAATGCCTCACCGGTGCCTGAAGAAGATGAGGATACTTTTGAGAGACATATAGAAGAGTACACTCAACCTGAAGAACGGATAGAAACTGCAGTTGATATAGCACGTCGGGAGCGTGAAGAAAGGAAAAGGCGATTGAAAAGAGAACGTGGAGATGATAGACCTGTCCATGTATCACAGTCAACAGGTTATGATCAGACGTTTCATGCAAAGACCCTTAAGTCATATGATAAAAGTAGGCTTCCTCCGGGGTGGTTGGACTGCCCTTCATTTGGTCAGgaaattttttgtttgataCCTTCCAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAAAGGGTTTTAGGGAGAAAACTAGGTTTGGTGATTGATTTGACAAATACTACTCGTTACTATCCAGTGACAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTATCTGTGAATCAGTTTGTCCATGAGGTTACTCAATTTCTATCACGTCAAAAACAACCCAAGAAGTATATACTTGTCCATTGTACGCATGGACATAATCGTACTGGATACATGATCATCCATTATCTTATGCGCTCAATGTCAATGTCTGTTACTCAGgcaattaaaatattttctgaCGCCCGCCCTCCAGGAATTTATAAACCCGATTACATTGATGCTTTGTATACATTTTATCATGAAAAAAAGCCTGAAATGGTAGTTTGTCCTCCTACACCAGAGTGGAAGAGATCCTCTGAACTAGATCTCAACGGTGAGGCAGTgcctgatgatgatgatgatgatggagtgCCAGACCCTCCTTCACATTGCTCTCAGGAGAACCATGAGACAGATGCAATTATGACAAATGATGATGTTTTGGGAGATGAGATACCTATTGATCAACAAGATGGATTTCGGCAGTTCTGTTATCAATCACTTAAATTGAGTTTTGGGGCCAGAGGACATGCACAATTTCCAGGGTCACATCCAGTTTCGCTAAACAGGGATAATTTACAATTATTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGATGGTACGCGATATATGATGCTAATAACTATGGATGGATGCTACTTGATTGATCGAAGTTTCAATTTTCGGAGGGTCCAAATGAGGTTTCCTTGCAGGGGTTCCAATGATGGGTTGGCTGAGAAGACCCACCACTACACTTTACTTGATGGGGAGATGATTATTGATACATTGCCAGAATCACAGAAGCAGGAGAGGAGATACcttatatatgatatgatagcCATTAACCATGTATCAGTGGTAGAGCGACCATTCTATGAACGGTGGAAGATGATTGAGAAAGAGGTTATTGAACCAAGGAATCAAGAACGGCAGAATATGTACCAGAGCAGAAATCCTTACTACAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTcacaaaacttttgaaagaattCATTCGAAGACTCTCGCATGACGCAGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTTCTGAAGTGGAAATATCCTGAGATGAATTCAGTTGATTTTCTCTTTGAGATTGATGATGATCGCCAGTTACTTTTTCTTTATGAACGAGGAAAGAAGAAACTCATGGAAGGAAATAGGGTTGCATTCAAGGATGGCTCAGATCCCTTGGTTTATTCAGGAAAGATCATAGAGTGTTCTTGGGATTCTGATGAACAGGAATGGAGGTGCATGCGAGTCAGGACAGATAAATCAACTCCGAATGATTTTAATACTTACAAGAAGGTGATGCGGAGTATAAGAGACAACATCACAGAGGAGGTCTTGCTGAATGAAATATATGAGATAATTCGCCTTCCCATGTATGCTGACAGGATAAAAATTGATAGTAAGGCCCACCATCATACTGGTGCAGCACGCCGGAGGTGA 2058 0.395 MIVDMDLNASPVPEEDEDTFERHIEEYTQPEERIETAVDIARREREERKRRLKRERGDDRPVHVSQSTGYDQTFHAKTLKSYDKSRLPPGWLDCPSFGQEIFCLIPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVTDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKQPKKYILVHCTHGHNRTGYMIIHYLMRSMSMSVTQAIKIFSDARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSELDLNGEAVPDDDDDDGVPDPPSHCSQENHETDAIMTNDDVLGDEIPIDQQDGFRQFCYQSLKLSFGARGHAQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPESQKQERRYLIYDMIAINHVSVVERPFYERWKMIEKEVIEPRNQERQNMYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIRRLSHDADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDRQLLFLYERGKKKLMEGNRVAFKDGSDPLVYSGKIIECSWDSDEQEWRCMRVRTDKSTPNDFNTYKKVMRSIRDNITEEVLLNEIYEIIRLPMYADRIKIDSKAHHHTGAARRR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2310 685 MobiDBLite consensus disorder prediction 36 62 - -
Sto1g2310 685 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 685 - -
Sto1g2310 685 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 265 IPR020422 GO:0006470|GO:0008138
Sto1g2310 685 Gene3D Protein tyrosine phosphatase superfamily 62 282 IPR029021 -
Sto1g2310 685 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
Sto1g2310 685 Pfam mRNA capping enzyme, catalytic domain 357 555 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sto1g2310 685 SUPERFAMILY Nucleic acid-binding proteins 558 669 IPR012340 -
Sto1g2310 685 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Sto1g2310 685 PIRSF mRNA_capping_HCE 73 685 IPR017074 GO:0004484|GO:0006370|GO:0140818
Sto1g2310 685 CDD Adenylation_mRNA_capping 353 556 IPR001339 GO:0004484|GO:0005524|GO:0006370
Sto1g2310 685 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Sto1g2310 685 CDD RNA_5'-triphosphatase 90 256 - -
Sto1g2310 685 ProSiteProfiles ATP-dependent DNA ligase family profile. 439 583 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Sto1g2310 685 Pfam mRNA capping enzyme, C-terminal domain 560 653 IPR013846 -
Sto1g2310 685 PANTHER MRNA-CAPPING ENZYME 3 685 - -
Sto1g2310 685 SMART dsp_5 121 261 IPR020422 GO:0006470|GO:0008138
Sto1g2310 685 MobiDBLite consensus disorder prediction 36 69 - -
Sto1g2310 685 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 276 IPR029021 -
Sto1g2310 685 Gene3D - 554 662 IPR012340 -
Sto1g2310 685 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 318 556 - -
Sto1g2310 685 MobiDBLite consensus disorder prediction 283 313 - -
Sto1g2310 685 Gene3D DNA ligase/mRNA capping enzyme 316 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2310 Sto-Chr1 31051871 31061305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2310 1 685 Protein tyrosine phosphatase (PTP) family AT3G09100 71.616 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2310 K13917 - gmx:100776633 1199.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2310 1 31051871 31061305 Sto1g2310 1 31051871 31061305 ECH