Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2283 ATGATTGGAAATTGTTTTCGTGCCTTGAAAAGAGGCAAAAGGAGGAAAAATAAAGCTGAACAATCGCATGAACAAGTGATATCGACTAAAAAATTCAGCTATAACTCATTGAGATCAGCAACAGGAGACTTTCATCCATCGAGTAAAATTGGTGGAGGTGGTTATGGAGTGGTCTACAAGGGGGTTCTACGGGATGGAACTGAAGTTGCTATCAAGTCTCTCTCAGTAGAGTCCAAACAAGGAACAAAAGAGTTTATGACAGAAATTGATATGATATCGAATGTACGGCATCCAAACCTTGTGCAATTAGTTGGCTGTTGTGTCGAAGGCAACCATCGCATTTTGGTATACGAATTTCTGAAGAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCTAAAAGTAAATATGTTGATCTGGATTGGCCAAAGAGGGCTGCTATTTGCCGTGGAACAGCTTCTGGTCTTGCATTTCTTCATGAAGAGACACAACCAAACATTGTTCACAGAGACATCAAGGCTAGCAACATACTGCTTGATGAGAACTTTAGTCCTAAAATAGGGGACTTTGGTCTTGCAAAACTTTTTCCGGACAATGTTACTCATGTCAGCACTCGAGTGGCCGGAACTGTAGGATATCTTGCCCCAGAATATGCACTTCTAGGACAGCTTACAAAGAAGGCTGATGTGTACAGTTTTGGTGTTCTCATGCTTGAACTAATCAGTGGTAAAAGTAGTAGCAAAGCTGCATTTGGAGATAACCTGTTGGTTCTGGTTGAATGGATTTGGAAGCTGAAAGAAGAAAACAGGCTTCTAGACATTGTTGATCCTGAACTAACTTCGTACCACAAAAACGAGGTTTTGCGTTTCATTAAGGTTGCTCTGTTTTGTACCCAAAAGGTTTCTCATCATAGACCAACCATGAAGCAAGTAGTGGAAATGCTTTCCAAGAGAGTTCACCTTAATGACAAGGCTTTAACTGAGCCTGGAGTTTTTAGGTGGCATTCCAAAGCCACTTCGGTAAGTTCTTTGGATGAGACTTCAACTTCTCAAGCCAAAAATCCATATGGAACCTCAAATTACTTCAGTGGTTCTGATATTGTGACAGAGATGCTTCCTAGATGA 1122 0.4082 MIGNCFRALKRGKRRKNKAEQSHEQVISTKKFSYNSLRSATGDFHPSSKIGGGGYGVVYKGVLRDGTEVAIKSLSVESKQGTKEFMTEIDMISNVRHPNLVQLVGCCVEGNHRILVYEFLKNNSLASSLLGSKSKYVDLDWPKRAAICRGTASGLAFLHEETQPNIVHRDIKASNILLDENFSPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLELISGKSSSKAAFGDNLLVLVEWIWKLKEENRLLDIVDPELTSYHKNEVLRFIKVALFCTQKVSHHRPTMKQVVEMLSKRVHLNDKALTEPGVFRWHSKATSVSSLDETSTSQAKNPYGTSNYFSGSDIVTEMLPR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2283 373 SUPERFAMILY Protein kinase-like (PK-like) 20 314 IPR011009 -
Sto1g2283 373 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Sto1g2283 373 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 359 - -
Sto1g2283 373 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 359 - -
Sto1g2283 373 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2283 373 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Sto1g2283 373 SMART serkin_6 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2283 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Sto1g2283 373 CDD STKc_IRAK 63 316 - -
Sto1g2283 373 PIRSF ILK 6 325 - -
Sto1g2283 373 Pfam Protein kinase domain 45 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2283 373 Gene3D Phosphorylase Kinase; domain 1 6 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2283 Sto-Chr1 30799822 30802668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2283 14 366 Receptor kinase-like Gene Family AT1G56120 48.739 2.39e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto1g2283 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2283 - - gmx:100816683 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2283 1 30799822 30802668 Sto1g2283 1 30799822 30802668 ECH