Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2279 ATGGCCGCTTCCGCTTCCGCCGCATCTTCCTTCATCGGCACGGTCCTCCCGGACGTGTACTCCAATTCGGGTCGGGTCGTGGCGCGATTCGGGTTCGGAGGCAAGAAAAGTCCGGCCAAGAAGGCATCGAGGCAGCCTAGCAACGATAGGCCGTTATGGTACCCCGGTGCGAAGGCGCCGGAGTGGTTGGACGGAAGCCTCGTCGGCGATTACGGATTCGACCCGTTCGGGTTGGGAAAACCGGCGGAGTACCTGCAGTTCGAGCTGGACTCGTTGGATCAGAACCTGGCGAAGAATTTGGCCGGAGATGTGATCGGAACGCGAACGGAGGCCGCGGATGTCAAATCGACGCCGTTTCAGCCTTACAGCGAAGTGTTCGGGTTGCAGAGATTCCGTGAGTGCGAGCTCATTCATGGACGGTGGGCCATGCTCGCGACGCTCGGAGCCCTCTCCGTTGAATGGCTCACCGGCGTGACCTGGCAAGACGCCGGGAAGGTAGAGCTAGTTGAGGGTTCATCCTACCTTGGGCAGCCACTTCCCTTCTCACTCACCACACTGATCTGGATTGAGGTTCTGGTGATTGGTTACATTGAGTTCCAGAGGAACGCCGAGCTCGACCCCGAGAAGAGGCTGTACCCGGGCGGCAAGTTCTTCGACCCACTCGGCTTAGCCGCCGACCCGGAGAAGAAGGCCACCCTTCAGTTGGCAGAGATCAAGCATGCCCGTCTAGCCATGGTTGCCTTCCTTGGCTTTGCAGTTCAAGCTGCTGTCACTGGAAAAGGCCCTCTCAACAATTGGGCTACCCATTTGAGTGACCCTCTTCACACAACCATCATTGACGCTTTCACttcctcttaa 858 0.5793 MAASASAASSFIGTVLPDVYSNSGRVVARFGFGGKKSPAKKASRQPSNDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDVIGTRTEAADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDAFTSS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2279 285 Gene3D Chlorophyll a/b binding protein domain 53 285 - -
Sto1g2279 285 SUPERFAMILY Chlorophyll a-b binding protein 45 283 - -
Sto1g2279 285 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 284 - -
Sto1g2279 285 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Sto1g2279 285 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 284 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2279 Sto-Chr1 30777982 30779630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2279 15 285 Chloroplast and Mitochondria Gene Families AT3G08940 85.978 1.25e-174 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2279 K08915 - rcu:8267514 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2279 1 30777982 30779630 Sto1g2279 1 30777982 30779630 ECH