Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2261 ATGGGCAACTGTTGCAGATCTCCGGCTGCCGTTGCCAGGGAGGACGTGAAATCGAGCTTCTCCGGCCACGATCACGGCAAGCGAGACTCCGTCGCCGGCAAGAAGGCTCCGATCACCGTCTTGACTGGCGTGCCCAAGGAGAACGTAGAGGACAAGTACTTGTTGGATCGGGAGCTCGGACGTGGCGAGTTCGGGGTAACTTATCTTTGTATTGATCGGGAAACCAGGGAGCTACTTGCTTGCAAGAGTATTTCCAAGCGGAAGCTCAGGACCGCGGTGGACGTTGAGGATGTGAGGCGTGAGGTGGCTATCATGAAGCACTTGCCTATGAGTTCTAGCATTGTGAGCTTGAAGGAGGCTTGTGAAGACGACAATGCGGTACATTTGGTGATGGAGCTGTGCGAGGGTGGTGAGCTGTTTGATCGGATTGTAGCGCGTGGGCATTATACGGAGCGAGCTGCGGCGGCGGTGATGAGGACGATTGTGGAAGTTGTGCAACTTTGTCACAAGCATGGAGTTATTCATAGGGACTTGAAACCGGAGAACTTCTTGTTTGCCAATAAGAAGGAGAATTCGCCTTTGAAGGCTATTGATTTTGGGCTGTCTATATTCTTCAAGCCAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGGCCAGAAATAGATATATGGAGTGCAGgagtaattctctatatcttACTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAACAAGGCGTTGCACAGGCCATTATTCGAGGGCTCATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCAGAGAGTGCTAAAAGTCTTGTTCGGCAAATGTTAGAGCCAGACCCTAAGCTTCGACTAACTGCAAAGCAGGTGCTTGAGCATCCTTGGCTTCAAAATGCAAAGAAGGCTCCTAATGTTCCTCTGGGTGATGTTGTGAAGTCAAGGCTTAAGCAGTTTTCAATGATGAACAGATTCAAACGAAAAGCACTGAGGGTTATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGATATCAAGGAAATGTTCAAAAAGATGGACAGTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAGGCTGGATTTCGGAACTTCGGATCCCAACTTGCTGAGTCTGAAGTCCAGATGCTTATCGAAGCTGTAGATACTAATGGGAAGGGAACACTTGACTGCGGAGAATTTGTTGCAGTTTCCCTCCATTTAAAACGGATGGCTAATGATGAACATCTTCGCAAGGCCTTCTCCTGTTTTGACAAGGATGGGAATGGCTATATTGAACCAGATGAGCTGAGGGATGCTTTGATGGAAGATGGAGAAAATGATTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTGGACACAGACAAGGATGGACGTATCAGCTATGATGAATTTGTTGCCATGATGAAAACTGGAACAGATTGGAGAAAAGCATCTCGGCATTACTCAAGAGGGAGATTCAACAGCCTGAGCTTGAAGTTAATGAAAGATGGTTCTCTAAACCTAGGGACTGAGTAG 1584 0.4621 MGNCCRSPAAVAREDVKSSFSGHDHGKRDSVAGKKAPITVLTGVPKENVEDKYLLDRELGRGEFGVTYLCIDRETRELLACKSISKRKLRTAVDVEDVRREVAIMKHLPMSSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVMRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAIIRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKEMFKKMDSDNDGIVSIEELKAGFRNFGSQLAESEVQMLIEAVDTNGKGTLDCGEFVAVSLHLKRMANDEHLRKAFSCFDKDGNGYIEPDELRDALMEDGENDCTDVANDIFQEVDTDKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGTE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2261 527 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Sto1g2261 527 SUPERFAMILY Protein kinase-like (PK-like) 39 336 IPR011009 -
Sto1g2261 527 Pfam EF-hand domain pair 357 417 IPR002048 GO:0005509
Sto1g2261 527 Pfam EF-hand domain pair 429 492 IPR002048 GO:0005509
Sto1g2261 527 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Sto1g2261 527 Gene3D - 320 495 - -
Sto1g2261 527 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Sto1g2261 527 CDD EFh 430 492 IPR002048 GO:0005509
Sto1g2261 527 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2261 527 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 6 508 - -
Sto1g2261 527 SUPERFAMILY EF-hand 340 518 IPR011992 -
Sto1g2261 527 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Sto1g2261 527 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Sto1g2261 527 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2261 527 Gene3D Phosphorylase Kinase; domain 1 54 138 - -
Sto1g2261 527 SMART efh_1 466 494 IPR002048 GO:0005509
Sto1g2261 527 SMART efh_1 430 458 IPR002048 GO:0005509
Sto1g2261 527 SMART efh_1 394 422 IPR002048 GO:0005509
Sto1g2261 527 SMART efh_1 358 386 IPR002048 GO:0005509
Sto1g2261 527 CDD STKc_CAMK 52 310 - -
Sto1g2261 527 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Sto1g2261 527 Pfam Protein kinase domain 55 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2261 527 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Sto1g2261 527 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Sto1g2261 527 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Sto1g2261 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 508 - -
Sto1g2261 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2261 Sto-Chr1 30609303 30614287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2261 1 409 EF-hand Containing Proteins AT3G51850 88.049 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto1g2261 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2261 K13412 - zju:107430894 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2261 1 30609303 30614287 Sto1g2261 1 30609303 30614287 ECH