Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2193 ATGACCACTCCCTTGGCTTATCAAGAGCACCTCCCTGCATCTCCAGAATGGCTAAACAAAGGAGACAACGCATGGCAGATGACCGCAGCCACACTGGTGGGTCTCCAAAGCATGCCAGGACTTGTGATTCTATATGCCAGCATCGTTAAGAAAAAATGGGCTGTGAACTCTGCTTTCATGGCTCTCTATGCCTTTGCTGCTGTACTCATATGTTGGGTCCTTGTTTGCTACAGAATGGCCTTTGGAGACCAACTCCTTCCCTTTTGGGGTAAGGGTGCCCCAGCTCTAGGCCAAAAGTTCCTCATAAACAGAGCCAAAGTCCCAGAAAGCACACACTACCACAAGAATGGAACTCTAGAAACCCCAACAGCAGAACCATACTTTCCCATGGCTTCCCTTGTGTATTTTCAATTCACTTTCGCTGCTATCACATTAATCTTACTAGCTGGTTCTGTTCTTGGCCGTATGAACATCAAGGCCTGGATGGCTTTTGTCCCTCTTTGGCTCATTTTCTCATACACCGTAGGGGCATTCAGTTTATGGGGTGGTGGGTTCCTCTACCACTGGGGCGTCATCGATTACTCCGGCGGCTACGTCATCCACCTCTCCTCCGGCGTCGCTGGCTTCACTGCGGCATACTGGGTTAGCGATTTGGTTAAATTTCAGGTGGGACCGAGGCTGAAGAGCGATAGAGAGAGGTTTCCACCGAACAATGTGCTTCTGATGCTTGCGGGAGCTGGGCTGCTATGGATGGGATGGTCGGGATTCAATGGCGGAGCGCCATACGCGGCGAGCATTGATTCGTCGATAGCAGTGTTGAACACGAACGTGTGCGCAGCCACAAGCCTTCTAGTATGGACGTCGCTCGACGTCGTTTTCTTCGGAAAGCCTTCCGTGATCGGAGCTGTTCAGGGTATGATGACCGGACTTGTTTGCATCACTCCGGGAGCAGGGCTAGTACAATCATGGGCGGCTATAGTAATGGGAATGCTATCAGGAAGCATTCCATGGGTTTCCATGATGATCCTTCACAAAAAGTCCGCTCTTCTCCAAAAGGTAGATGACACCCTAGGAGTATTTCACACACACGCAGTGGCAGGACTTTTGGGTGGGCTCCTCACCGGCCTATTGGCCGAGCCGGAACTCTGCCGGTTGCTATTGCCAGTGACCAACTCGAGGGGCGCCTTCTATGGCGGAAGTGGCGGCGTGCAATTTTTGAAGCAGTTGGTGGCAGCCCTATTTGTGATTGGATGGAATTTAGTGTCTACCACTATCATTCTTCTTGCCATCCGACTCTTTATACCTTTGAGGATGCCGGACGAGCAGCTCGAGATCGGCGACGATGCCGTGCACGGCGAGGAAGCCTATGCTCTTTGGGGTGATGGAGAGAGATATGACCCAACCAAGCATGGCTCCTTTGATGTTCATGATACTATAGCATCACCTTATGTGAATGGTGCAAGAGGTGTTACCATAAATTTATAG 1485 0.5091 MTTPLAYQEHLPASPEWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKFLINRAKVPESTHYHKNGTLETPTAEPYFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGVAGFTAAYWVSDLVKFQVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASIDSSIAVLNTNVCAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGMLSGSIPWVSMMILHKKSALLQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPELCRLLLPVTNSRGAFYGGSGGVQFLKQLVAALFVIGWNLVSTTIILLAIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGERYDPTKHGSFDVHDTIASPYVNGARGVTINL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2193 494 Pfam Ammonium Transporter Family 24 456 IPR024041 GO:0008519|GO:0016020|GO:0072488
Sto1g2193 494 PANTHER AMMONIUM TRANSPORTER 1 491 - -
Sto1g2193 494 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005887
Sto1g2193 494 PRINTS Rhesus blood group protein signature 240 258 IPR002229 GO:0005887
Sto1g2193 494 PRINTS Rhesus blood group protein signature 271 293 IPR002229 GO:0005887
Sto1g2193 494 PRINTS Rhesus blood group protein signature 326 344 IPR002229 GO:0005887
Sto1g2193 494 PRINTS Rhesus blood group protein signature 364 380 IPR002229 GO:0005887
Sto1g2193 494 PANTHER AMMONIUM TRANSPORTER MEP2 1 491 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sto1g2193 494 TIGRFAM amt: ammonium transporter 22 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sto1g2193 494 Gene3D Ammonium transporter AmtB like domains 4 459 IPR029020 -
Sto1g2193 494 SUPERFAMILY Ammonium transporter 17 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2193 Sto-Chr1 30060194 30064658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2193 130 494 Inorganic Solute Cotransporters AT2G38290 76.839 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2193 K03320 - gmx:100790119 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2193 1 30060194 30064658 Sto1g2193 1 30060194 30064658 ECH