Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2191 ATggcttcatcatcatcaaaacTTGGTTTCCtcctcctcttgctctttctttctctcctaGTTGCTTCCAAGGCTCAACAAGAGAGTCACTTTGTGTTCAATGGATTTAATAATACTGGAGAAAGTGATCTTATCCTTCAAGGTGCTACCATTATCAAATCCAATGGTTTGCTTAAGCTCACTAACAAAACATACAATACCAAAGGCCAAGCTTTTCATTCCAAACTCTTTCAATTTCAAAAGCTTAATACATCAACCAAACAGCAAGAAGCTTCTTCCTTTAGCACAACCTTTGTTTTCTCTATTGTCCCTTCATCCTCTGGCTCTGGTGGCTTTGGCCTTGCTTTTGCCATAACACCCAAAACCAATCTTTCTGATGCTGAACCTGGCCATTTTCTTGGTCTTTTTAACAACTTCACTGATGGGAATCCTTCGAATCACATTCTTGCAGTGGAATTCGATACGGTAAATGGCTTCAGAGGTGAGTCTGACACTGAAGGGAACCATATTGGGGTCAATATAAATGGCATGCAGTCAAAGTTTTCTGAACCTGCTGCTTACATTGAAGAAGGCACAGAGGCTCAAAAGGAAGAATTCAATATGGAGAAATCTAATGCTGTACAAGCTTGGATAGATTATGATGGTGACAAGAAAGTTTTGAATGTGACTATAGCTCCTTTTCCACTAAAAAAACCCTCCAAACCACTCATATCTGAATTCATAGACCTTAAGGATGTTCTAAGGGAAAACATGTACATTGGTTTCTCAGCAGCAACAGGAAACATCAAAGCAAGCTCTCATTACATTCTGGGATGGAGCTTTTCAATGAATGGAAGTGCTCCTCCACTCAACAATTCCCTCCTTCCAGCAGCACCATCAAAGGAGAGTGATTCAGTTTCCTCCTCTTTCCCTTGGGTCAAGTTTGCCATAGTATTTCTGTCTGCTTTAACCTTAATCTTGCTGTTTTCTATGTGTTTTCTAACGTTGTACAAGAGGTACACCCGTTTTGAGACTCTTGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAAATACAGAGATCTTCACATAGCAACTAAAGGATTCAAAGAGAGTGAGCTAATTGGAGTTGGAGGCTTTGGTGCTGTGTACAAAGGTGTGTTGCCTTCTTCAGGAACTGAGGTTGCTGTGAAGAAGATTTTCCGTAGTCCGGTCCAAGGAATGCGGGAATTCGCGGCCGAAATcgaaagcttgggaagattAAGGCACAAAAACTTGGTCAATCTTCAAGGATGGTGGACAATTGGGTATATAGCACCAGAGTTGATTCGTACAGGAAAGGCTTCTACAAGCTCTGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTGGCTACTGCAAGAAGGCCTATTGGGTCAGATCATTTTTTCTTGGTGGATTGGATTGTGGAGAACTACAATTTGGGTCAGATTCTTGAAGTGATAGATCCTAAGTTGAACTCAGTTTATGTTGAGGAAGAAGTGGAATTGGTACTGAAACTAGGTCTTCTATGTGCTCAGCATAATGCAGATTCAAGACCTACTATGAGACAAGTCACAAGGTACTTGAATTTTGATTACCCTCTTCCTGAAATTGGTGATTGGAGAAGGCATAGTGAGTCTGAGAGTGGCATAGTGAGCTTTGGTTTCTCAGAAATGGTGTCTACTAGTACTTTCTCGACAACTTCATGTAATATATCATCCAACATTAGCATGAATAGTAGATCCTCTGATGTTTCTTGTGTTCTGAACTATTCTGGTGATGATGCTGCTTCTGCATATTTGTACTGGATGAGCATGGCAGAATAG 1827 0.3935 MASSSSKLGFLLLLLFLSLLVASKAQQESHFVFNGFNNTGESDLILQGATIIKSNGLLKLTNKTYNTKGQAFHSKLFQFQKLNTSTKQQEASSFSTTFVFSIVPSSSGSGGFGLAFAITPKTNLSDAEPGHFLGLFNNFTDGNPSNHILAVEFDTVNGFRGESDTEGNHIGVNINGMQSKFSEPAAYIEEGTEAQKEEFNMEKSNAVQAWIDYDGDKKVLNVTIAPFPLKKPSKPLISEFIDLKDVLRENMYIGFSAATGNIKASSHYILGWSFSMNGSAPPLNNSLLPAAPSKESDSVSSSFPWVKFAIVFLSALTLILLFSMCFLTLYKRYTRFETLEDWELDCPHRFKYRDLHIATKGFKESELIGVGGFGAVYKGVLPSSGTEVAVKKIFRSPVQGMREFAAEIESLGRLRHKNLVNLQGWWTIGYIAPELIRTGKASTSSDVYAYGVLLLEVATARRPIGSDHFFLVDWIVENYNLGQILEVIDPKLNSVYVEEEVELVLKLGLLCAQHNADSRPTMRQVTRYLNFDYPLPEIGDWRRHSESESGIVSFGFSEMVSTSTFSTTSCNISSNISMNSRSSDVSCVLNYSGDDAASAYLYWMSMAE 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2191 608 SUPERFAMILY Protein kinase-like (PK-like) 347 532 IPR011009 -
Sto1g2191 608 PANTHER - 12 425 - -
Sto1g2191 608 PANTHER - 427 569 - -
Sto1g2191 608 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 427 569 - -
Sto1g2191 608 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 12 425 - -
Sto1g2191 608 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Sto1g2191 608 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 293 IPR013320 -
Sto1g2191 608 Gene3D Phosphorylase Kinase; domain 1 347 426 - -
Sto1g2191 608 ProSiteProfiles Protein kinase domain profile. 362 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2191 608 Pfam Legume lectin domain 29 287 IPR001220 GO:0030246
Sto1g2191 608 ProSitePatterns Protein kinases ATP-binding region signature. 368 392 IPR017441 GO:0005524
Sto1g2191 608 CDD lectin_legume_LecRK_Arcelin_ConA 30 278 IPR001220 GO:0030246
Sto1g2191 608 Gene3D Transferase(Phosphotransferase) domain 1 427 536 - -
Sto1g2191 608 Pfam Protein tyrosine and serine/threonine kinase 428 528 IPR001245 GO:0004672|GO:0006468
Sto1g2191 608 Gene3D - 27 282 - -
Sto1g2191 608 Pfam Protein kinase domain 362 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2191 Sto-Chr1 30037118 30040777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2191 427 540 Receptor kinase-like Gene Family AT3G08870 47.368 5.37e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g2191 Lectin_legB 3.6e-74 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2191 - - gmx:100792854 493.426