Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2190 ATGgctgcatcatcatcatcatcacttagtttgctcttcctcttcctctctctccttGTTGTTGCAGCCCAGGCCAACTTTGTCCTTCATGGATTCGAAGTCGACGTCTGTGGAAGAAATCTAACCTGTGAAGGAGTTGCCGTTATCAGAGACAAAATGCTTAAGCTTACCAACAGATCAAACGACGTTATAGGCAGTTCTTTCTATAAAATACCTTTCCCTATGCTTGATACCCAAAAGAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCTATTGTCCCTTCAACTTCTGAACCTGGTGGCTTTGGCCTTGCTTTCACCATAGCTCCTAAAACCAGTTTTTCAGAGGCTGAATCTGGCCATTTTCTTGGTCTTTTTAACAGTGCAAATAATGGGGTTtcttcaaatcatatatttgcaGTTGAATTTGATACGGTAGATGGCTCAGGCCAAGGCGAGTCTGACAAAGAAGGAAACGAGGTTGGGGTCAATATCAATGGCCTGACCTCAACCTTCTTTAAACCTGCTGGCTACTTCAATGAACATGCTCAAATGGTAAACTTCAGTATGGAGGAATCTGATGCTGTACAAGCTTGGATAGATTATGATGGTGGTAGCCAAATTTTGAATGTGACTATAGCTCCTTATCAATTAGGAAAACCCTCTGAACCACTAATATCTAATTTCACTAACCTTACTGGTGTTCTGAATGAAACCATGTATGTTGGTTTCTCAGCATCAACAGGGGAAGCTAAAGCAAGCTCCCATTACATTCTGGGATGGAGTTTTTCAATGAATGGACCAGCTCGTTCACTTGATATTTCCAAGCTTCCTGATCCACCATCAAAGGAGAAAGACCCATCTTCTTTCCCTTGGGTCAAGGTTGCCATAGGATTTCTGTCTTCTTTAACCTTAATCTTGCTGTTTTCTACGTGTTTTCTAACGTTGTACAAGAGGTACAAGAGTCATTTTGAGACTCTTGAGGATTGGGAGCTAGATTGTCCCCACAGGTTCAAATACAGAGATCTCCACACAGCAACAAAAGGGTTCAAGCAGAGTGAGCTAATAGGATCTGGAGGGTTTGGTGCTGTGTACAAAGGTGTGTTGCCCACTACAGGAACTGAAGTGGCTGTGAAGAAGATTTTTCGTAGCCCAATCCATGGAATGAGGGAATTTGCAGCTGAAATTGAAAGCCTAGGAAGATTAAGACACAAAAACTTGATCAATCTTCAAGGATGGTCACCAGAGTTGACTCGTACAGGAAAGGCTTCTACAAGCTCTGATGTGTATGCTTATGGAGTTCTGCTTCTTGAAGTGGCTACAGGAAGAAGACCTATTGGGGGTGGGACATCACAGTTTTTCTTGGTGGATTGGGTTGTGGAGAATCAGAATCTGGGTCAGATTCTTGAAGTGGTTGACCCAAAGTTGAACTCAGTTTATGATGAGGAAGAAGTGGAATTGGTTCTGAAACTAGGTCTTCTATGTGCTCAGCATAATGCAGATTCAAGACCCACCATGAGACAAGTCACAAGGTACTTGAACTTTGATGACCCTCTTCCTGAAATTGGTGGTTGGAGAAGAAACAGTGATTCTGAGAGTAGCAGAATGAGCTTTGGTTTCTTAGAAATAGTGTCTACAAGTAGTATCTCTACCTCACAGAACTTATCCTCCTGTATTAGCATGAATAATAGTAAGACTATAGAAGCTGGTagatag 1719 0.4008 MAASSSSSLSLLFLFLSLLVVAAQANFVLHGFEVDVCGRNLTCEGVAVIRDKMLKLTNRSNDVIGSSFYKIPFPMLDTQKKVSSFSTSFVFSIVPSTSEPGGFGLAFTIAPKTSFSEAESGHFLGLFNSANNGVSSNHIFAVEFDTVDGSGQGESDKEGNEVGVNINGLTSTFFKPAGYFNEHAQMVNFSMEESDAVQAWIDYDGGSQILNVTIAPYQLGKPSEPLISNFTNLTGVLNETMYVGFSASTGEAKASSHYILGWSFSMNGPARSLDISKLPDPPSKEKDPSSFPWVKVAIGFLSSLTLILLFSTCFLTLYKRYKSHFETLEDWELDCPHRFKYRDLHTATKGFKQSELIGSGGFGAVYKGVLPTTGTEVAVKKIFRSPIHGMREFAAEIESLGRLRHKNLINLQGWSPELTRTGKASTSSDVYAYGVLLLEVATGRRPIGGGTSQFFLVDWVVENQNLGQILEVVDPKLNSVYDEEEVELVLKLGLLCAQHNADSRPTMRQVTRYLNFDDPLPEIGGWRRNSDSESSRMSFGFLEIVSTSSISTSQNLSSCISMNNSKTIEAGR 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2190 572 Pfam Protein kinase domain 351 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2190 572 ProSitePatterns Protein kinases ATP-binding region signature. 357 381 IPR017441 GO:0005524
Sto1g2190 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 283 IPR013320 -
Sto1g2190 572 Gene3D - 21 269 - -
Sto1g2190 572 Gene3D Phosphorylase Kinase; domain 1 336 417 - -
Sto1g2190 572 SUPERFAMILY Protein kinase-like (PK-like) 336 520 IPR011009 -
Sto1g2190 572 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 415 560 - -
Sto1g2190 572 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 11 414 - -
Sto1g2190 572 CDD lectin_legume_LecRK_Arcelin_ConA 26 268 IPR001220 GO:0030246
Sto1g2190 572 Pfam Protein tyrosine and serine/threonine kinase 415 513 IPR001245 GO:0004672|GO:0006468
Sto1g2190 572 Pfam Legume lectin domain 25 279 IPR001220 GO:0030246
Sto1g2190 572 PANTHER - 415 560 - -
Sto1g2190 572 PANTHER - 11 414 - -
Sto1g2190 572 Gene3D Transferase(Phosphotransferase) domain 1 418 519 - -
Sto1g2190 572 ProSiteProfiles Protein kinase domain profile. 351 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2190 Sto-Chr1 30028383 30030551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2190 415 523 Receptor kinase-like Gene Family AT3G08870 49.541 2.81e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g2190 Lectin_legB 1.9e-68 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2190 - - gmx:100791358 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2190 1 30028383 30030551 Sto1g2190 1 30028383 30030551 ECH