Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2189 ATGATGCAACCTGAGATTCTTCTTcagtcctcctcctcctcatcttTTGATCATTGTGAAGTTTCCTCATTCCCTTTTACTTCTTCTATCTCCTtttctgaagaagaagaagatcatcTCCAATTTCCAGTTGGACTGGGATCAAGAGCATCCAAATCCATAGAGAATTCCTATATCAATGAATTTGAAGTTTCCTCTATCTTCTTCTTGGAAGATCATCATCTTCAATACCCACTTattgaagaagaacaagaagaagatgcTTTACAACTCCCATCATTCACTGAGGATTTCTCTATGGATTTGGATGCTTTTGATCTCATTTCAAATACCCAGATTCTAGGTATCCGTGGATACCCACAAGAAAGTGAAGCTAGCTTTCTTCCTTCACAATCTCCCAACCTCTCCTCTGAAGCAGAAGATGCTTGGAGTCCTATCTCCTCCATGAAATCATCAGAATTTCCCATAGTTCAACAACAATCACTGAGCTTTCCACAACCGGACATGGAAATAGAGAACCAAGTGATTCTTCCACATCTTCTGGAAGCCTATGGAGAAGCCAGAGATCAGAATCAGAATGCTCTAGCAGAAGCAATCTTGAGATGCATGAGTCAGAAAGCTAGCTCTCAAGGAGAATACCCTCTGGAGCGCCTAGCATTCCACATGTCCTCCTCCCAAGACATGATGGAAGATCCTAAGGGGCATTTCATCAAACAGGAGGCGTGCAAGAATTTTGAACCAGCATTGAAGGCAACCTACCTAGGCCTCCCACATGGAAGATTTGCTCATTTTACAGCCAATTCAGCAATTCTTGATGCCATACCAGAGGATTCAGAAGTAATACACATAATAGACTTTGATATGAGAGAAGGGATTCAATGGCCTCTAATCATTGAGGCCATTTCTCAACAGAAGAAAAGACTGAAAATAACAATAATCACATGGGAAGGAGAGGAAAAAACCTCTGAACAGCCCAAAAGGAACCTCCTTGAACATGCAAGAACCTATGATGTACAATTGAAGATTGAAGAAAAGAGGTTTGAAGATTTGGTCACAGAACTCAAGAAACAGAACAAAAGGGGTGGGAGTATGATGAAAAGAGATTTCTTAGTGTTCAATTGCATGGTGGGTCTCCTTCATATgggaagaggaagaagcagAAGATGTGTAAATGAGTTTCTGAATTTAGCCAAGAACATGATCAACAATTGCAACAACAAGGGGATAATCACTTTTGGGGATGGAGAAGCCATTGAGAAACTGAGAAATAGCTTGAATTTCAAGTCATTTTTTGAGGGGAATTTGATGCATTACAAGGCCTTATTAGAGTCAATTGAATCAAATTTCCCAGCTCGTTTCTCAGAAGCAAGAACTTCCATAGAGTTCCTATTTGTGAGACCTTATGTCACTTCTGTGAATTGGATGAGCAAGTGGGAGGAAATTAGAGAAAGTTTCAATTTTGAGTCAGAGATTGGATTTGGATTAGAAGGAAGAAGATTGAGCAAAGGGATTTTGATGGAAGTGAGAGAAATGTTGAGAGGAAGTGAAGGGCCATACTATGAGGCAAGGGTTGAAGGACAAAATGGGAATGAAATGGTTTTGGAATGGAAAGGAACACAGCTAGACAAGTTCTGTGAAGTTGAGAAAGTACTTGTAGACACCATTTCTAAGAAACCAAAGCTCTTTTTGCTACTCTCAGAATCACTGTATCTCCTCCAATCACCAATTTCAGGAAGAGGATCTCTATATCTGAACCTGTGTGGACAATCTAGCTCCCAATCCTCAAGAGTCTCAAAATGGCTGTACCTCTTGTACAACGTTACAAAACACACAGAAAACAGTAAGATTAAGGTTAAAGCAGACAGAAATCCTATGGCAAACTTGGCCCATGGGAAAGAAGATGGGTCTTTCTCCTTTGATGGTGGAGGAGGAAGCTTGGGTCAAGTGAAGGAGCTGATCCATTCACTGAAAAACTCCATCCCAGTATGTGAAGCCTCTGAAAAATTGGTTTTGGGGGCTATGGTGAAAGAAAGGCCAAAGCCACCAGGTTCAGAGGTTGAAGAGACAATAGAGAAAACAAAGGATGTGCTAAAGGAATGGCAACTCCTTGACATGTTAGATTTCCTCCACAATCATCATGGAATCCATGAAAGACAAAGTTGGCCTGGGCTGCAAAAAcaaggaaagggaggaagagcAAGAGCAAACAAAGTGATGATGATAATGCAGCCATCAGATTCAgctggaggaagaagaggaattgATTGA 2268 0.3832 MMQPEILLQSSSSSSFDHCEVSSFPFTSSISFSEEEEDHLQFPVGLGSRASKSIENSYINEFEVSSIFFLEDHHLQYPLIEEEQEEDALQLPSFTEDFSMDLDAFDLISNTQILGIRGYPQESEASFLPSQSPNLSSEAEDAWSPISSMKSSEFPIVQQQSLSFPQPDMEIENQVILPHLLEAYGEARDQNQNALAEAILRCMSQKASSQGEYPLERLAFHMSSSQDMMEDPKGHFIKQEACKNFEPALKATYLGLPHGRFAHFTANSAILDAIPEDSEVIHIIDFDMREGIQWPLIIEAISQQKKRLKITIITWEGEEKTSEQPKRNLLEHARTYDVQLKIEEKRFEDLVTELKKQNKRGGSMMKRDFLVFNCMVGLLHMGRGRSRRCVNEFLNLAKNMINNCNNKGIITFGDGEAIEKLRNSLNFKSFFEGNLMHYKALLESIESNFPARFSEARTSIEFLFVRPYVTSVNWMSKWEEIRESFNFESEIGFGLEGRRLSKGILMEVREMLRGSEGPYYEARVEGQNGNEMVLEWKGTQLDKFCEVEKVLVDTISKKPKLFLLLSESLYLLQSPISGRGSLYLNLCGQSSSQSSRVSKWLYLLYNVTKHTENSKIKVKADRNPMANLAHGKEDGSFSFDGGGGSLGQVKELIHSLKNSIPVCEASEKLVLGAMVKERPKPPGSEVEETIEKTKDVLKEWQLLDMLDFLHNHHGIHERQSWPGLQKQGKGGRARANKVMMIMQPSDSAGGRRGID 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2189 755 ProSiteProfiles GRAS family profile. 168 548 IPR005202 -
Sto1g2189 755 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 542 IPR005202 -
Sto1g2189 755 Pfam GRAS domain family 179 541 IPR005202 -
Sto1g2189 755 Coils Coil 340 360 - -
Sto1g2189 755 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 62 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2189 Sto-Chr1 30010811 30016128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2189 168 461 GRAS Transcription Factor Family AT5G66770 28.618 4.00e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto1g2189 GRAS 2.4e-34 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2189 - - gmx:100784347 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2189 1 30010811 30016128 Sto1g2189 1 30010811 30016128 ECH