Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2163 ATGGGAGGGTGTTGCAGTTATGAGATATcgtgtggagggaaggtgattAGGCATAATGTTGGTAGAGATTATGGTGGTCATCGAGAGCAGGAAGAGATTGTGTATGGAGATTGTGGAGCTCGAATCAGGATAAGAGGTTCCTCTAGGTTTGTCTCAATGTATAGCCAACAAGGAAGTAAAGGAATTAACCAAGATGCATTAACAGTTTGGGAGAACTTCACCGGAGAAAAAGACATGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTTGGACACAAGGTTTCACATTTCATACGAGACAATCTTCCCTCAAAACTCTCTTCATCAATCAAAGTGTCTCAACAGAAGAAATTCAGCAAGTACTATGATGCTTGTGCTCCCTATAGAGGCACGTCTAATGAAGATAACCAAAACATGACTCTTGCTTCATGGgaatgcaaccttatcaagaCTTTCCAAGAGATGGATGAAGATGTTGCTCAGTACATCAATACTGATAGCTTTTCTAGTGGTACCACTGCTGTAACTGTAATTCAACAGGGTGATCATCTAATAATTGGAAATTTGGGGGATTCTCGTGCAATTCTTTGCACAAGAGGAGAAAATGATCAACTTACTCCCGTTCAACTTACTGTGGACTTGAAACCAGACATCCCAAGTGAAGCCTTAAGAATCCAAAATTGTGAAGGCAGAGTTTTTGCAGCAGTAGAAGAATCACAAGTGTACAGAGTATATATGCCTGATGAGGATTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTCTGCCTAAAAGATTATGGCCTCATCTCAGTTCCTGAAGTCTTTTATAGGAAAATAACTAAGCAGGATGAATTTGTGGTTTTGGCATCTGATGGGGATGCCTTCAATAACAAGTCTAGGAAAGTTCCTACTCAGAAATTGCTTACTTACTTGTCTGCTATACTTTCTATTGAGATTGACTTCTTCTATATACAAGAATCTTATTATGATGAGCATATAGTTAAAGTATCAAACTTCTTTTTTCAGATATGGGATGTGCTATCAAACACTGAAGTGATAAACATAGTTGCTTCGGCACCAAGAAGGTCGATGGCAGCGAAAATGCTGGTGAGGCACGCGGTCGCGACGTGGCGATACAAGCATCCTAGTGCCAAGGTTGATGATTGTGCAGCCATATGCTTGTTCCTGACAGAtcaacctcctcctcctccttcaagCAATTGTCCATCTGATATTAATAGTAGCCTTCTTAGTCGCCATAGGAAGCAGCTGCCTCCTCTTCCTCATGGCTCTAAATCCATCAAACTCGAAGACACGGATACTTGTTTAGATGATGGAAAGAGTTCTGTGGTAGATTTAGGACAAGACATAACGGAGGGCGGTTTCCGAGGGTTGTCTCAAGCTAACTCGGTGTCCAATTCGAAACAACCTCGGATCTCTAGGGTTGTCAGTAGAAGGCAATCGACTTCGTCATCATCTCAGTACAACATTGATGGGGGAGTTGAAGTTCACTAG 1524 0.3996 MGGCCSYEISCGGKVIRHNVGRDYGGHREQEEIVYGDCGARIRIRGSSRFVSMYSQQGSKGINQDALTVWENFTGEKDMIFCGVFDGHGPLGHKVSHFIRDNLPSKLSSSIKVSQQKKFSKYYDACAPYRGTSNEDNQNMTLASWECNLIKTFQEMDEDVAQYINTDSFSSGTTAVTVIQQGDHLIIGNLGDSRAILCTRGENDQLTPVQLTVDLKPDIPSEALRIQNCEGRVFAAVEESQVYRVYMPDEDCPGLAMSRAFGDFCLKDYGLISVPEVFYRKITKQDEFVVLASDGDAFNNKSRKVPTQKLLTYLSAILSIEIDFFYIQESYYDEHIVKVSNFFFQIWDVLSNTEVINIVASAPRRSMAAKMLVRHAVATWRYKHPSAKVDDCAAICLFLTDQPPPPPSSNCPSDINSSLLSRHRKQLPPLPHGSKSIKLEDTDTCLDDGKSSVVDLGQDITEGGFRGLSQANSVSNSKQPRISRVVSRRQSTSSSSQYNIDGGVEVH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2163 507 Pfam Protein phosphatase 2C 67 295 IPR001932 -
Sto1g2163 507 MobiDBLite consensus disorder prediction 465 501 - -
Sto1g2163 507 CDD PP2Cc 49 399 IPR001932 -
Sto1g2163 507 SUPERFAMILY PP2C-like 346 401 IPR036457 -
Sto1g2163 507 SUPERFAMILY PP2C-like 48 295 IPR036457 -
Sto1g2163 507 Gene3D - 44 301 IPR036457 -
Sto1g2163 507 Gene3D - 345 401 IPR036457 -
Sto1g2163 507 PANTHER ALPHABET, ISOFORM E-RELATED 345 423 - -
Sto1g2163 507 PANTHER ALPHABET, ISOFORM E-RELATED 1 295 - -
Sto1g2163 507 SMART PP2C_4 40 397 IPR001932 -
Sto1g2163 507 MobiDBLite consensus disorder prediction 465 507 - -
Sto1g2163 507 ProSiteProfiles PPM-type phosphatase domain profile. 50 399 IPR001932 -
Sto1g2163 507 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 345 423 - -
Sto1g2163 507 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2163 Sto-Chr1 29852438 29856226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2163 1 405 PP2C-type Phosphatase Gene Family AT5G01700 46.731 1.78e-113 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2163 - - gmx:100783603 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0447 6 4919064 4929952 Sto1g2163 1 29852438 29856226 CCT
Sto1g2163 1 29852438 29856226 Sto1g2163 1 29852438 29856226 ECH