Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2145 ATGGGGGCATCTCTTCTTCGCCTTCACTTCCATGATTGTTTTGTCCaaGGATGTGATGGTTCAGTATTGTTAGACGATACAGAAAATTTCACAGGGAAAAAGAGTGCATTACCAAATTTGAATTCTCTGAGGGGATTTGATGTAATAGACGACATCAAATCTCAAATAGAGGCCGTGTGTCCTGCTGTTGTATCTTGCGCTGATATTTTAATCGTTGCTGCGAGAGATTTTGTTGTTGCTTTAGGTGGACCTAGTTGGATAGTGAAATTGGGAAGAAGAGATTCAACAACGGCAAGCTTAAGCGCTGCTAATTCTGATTTACCATCTCCCTTTCAAGATCTCACTGCACTTATCACTGCTTTCTCTAACAAAGGTTTCACGCCTCAAGAAATGGTTGCTCTATCAGGATCACACACAATAGGGGAAGCGAGATGCGGAACCTTCAGAACAAGGATATACAATGAGACAAACATagattcctcatttgcttcaacACTTGAAGCAAATTGTCCTTTCACAGGTGGGGATAACACTTTGTCCCCTCTTGATTTCACTTCTCCAATCAAATTCGACAATGCCTACTTCAAGAACTTGTTGTCCCAGAAGGCACTCTTGCACTCTGATCAACATCTCTTCAATGGAGGATTAGGCTTTGCTGATGCCATGCTCAAAATGAGCAACCTTACCCCACTCACTACTCCCTCTAGTGATGCTCAGATTAGGCTTAATTGTAGAAagctcaattaa 747 0.4029 MGASLLRLHFHDCFVQGCDGSVLLDDTENFTGKKSALPNLNSLRGFDVIDDIKSQIEAVCPAVVSCADILIVAARDFVVALGGPSWIVKLGRRDSTTASLSAANSDLPSPFQDLTALITAFSNKGFTPQEMVALSGSHTIGEARCGTFRTRIYNETNIDSSFASTLEANCPFTGGDNTLSPLDFTSPIKFDNAYFKNLLSQKALLHSDQHLFNGGLGFADAMLKMSNLTPLTTPSSDAQIRLNCRKLN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2145 248 PANTHER PEROXIDASE 72-RELATED 1 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 Gene3D - 1 245 - -
Sto1g2145 248 SUPERFAMILY Heme-dependent peroxidases 1 248 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 Pfam Peroxidase 1 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 ProSiteProfiles Plant heme peroxidase family profile. 1 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2145 248 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Sto1g2145 248 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Sto1g2145 248 Gene3D Peroxidase, domain 2 108 225 - -
Sto1g2145 248 PANTHER PEROXIDASE 1 248 - -
Sto1g2145 248 CDD secretory_peroxidase 1 246 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2145 Sto-Chr1 29649274 29650712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2145 1 248 Peroxidase AT5G05340 56.554 3.46e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2145 K00430 - qsu:112019242 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2145 1 29649274 29650712 Sto1g2145 1 29649274 29650712 ECH
Sto1g2145 1 29649274 29650712 Sto9g2267 9 26085504 26087436 ECH