Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2144 ATGGCGTCAACTaagtattgttattattattattactgcgTTTTGTTGTATGCTTTGGTAATTGCAGGTGTTAATGGAAGCACAATACTGTCTCCTTCGTTCTATGAATCATCATGTCCTAATGCTTTGAACACTATTAAACGAGTGGTTCAGGCTGCTGTTAAGAAAGAGCCTCGTATGGGAGCTTCTTTGCTTCGCTTGCACTTCCATGATTGTTTCGTTAATGGTTGTGATGGATCGATTCTTCTGGATGCTTCGGCTACCATAGACAGTGAGAAGAATGCAGTTGCGAATGCAAATAACTCTGCAAGAGGATTTGAAGTGATTGATCGGATCAAGCGAGAAGTGGACAAAGCTTGTGGTCGGACTCTTGTTTCTTGTGCTGACATTTTAGCTGTCGCAGCTAGAGACTCCGTTGTTGCGTTAGGTGGGCCAACATGGAAAGTGAGGCTCGGAAGAAGGGACTCCAAAACGGCAAGCCGAACCACAGCAAACGCAGACATCCCAGCGCCATTTATGTCCCTTCCCCAACTCATCCAAATCTTCAACAACCAAGGCCTAAACGACAAAGATCTTGTCGTTTTATCTGGGGCCCACACCATTGGGTTCTCTCGCTGCGTTTCCTTCAGAGACCACATCTACAACGACTCCAACATTGACCCCTCCTTCGCAAAAGCCCTTAGGAAGGGGTGTCCTATAAATGGAGGGGACACCAACCTAGGCCCATTGGACCCCACGGCCCAACACTTTGACGGTGCCTACTTCAACAATTTAGTTCACAAGAAAGGCCTTCTTCACTCTGATCAAGAACTCTTCAATGGTGGTTCTACGGATGAATTGGTTAGAAAATACAGCTACGATACCGTACGATTCTATGAGGATTTTGCTAAATCTATGATCAAAATGGGAAATATAAAGCCTCTTACGGGGAATCAAGGTGAAATTCGTTTGGATTGCAGGaaagttaactaa 972 0.4383 MASTKYCYYYYYCVLLYALVIAGVNGSTILSPSFYESSCPNALNTIKRVVQAAVKKEPRMGASLLRLHFHDCFVNGCDGSILLDASATIDSEKNAVANANNSARGFEVIDRIKREVDKACGRTLVSCADILAVAARDSVVALGGPTWKVRLGRRDSKTASRTTANADIPAPFMSLPQLIQIFNNQGLNDKDLVVLSGAHTIGFSRCVSFRDHIYNDSNIDPSFAKALRKGCPINGGDTNLGPLDPTAQHFDGAYFNNLVHKKGLLHSDQELFNGGSTDELVRKYSYDTVRFYEDFAKSMIKMGNIKPLTGNQGEIRLDCRKVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2144 323 ProSiteProfiles Plant heme peroxidase family profile. 29 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PANTHER PEROXIDASE 72-RELATED 24 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 Gene3D Peroxidase, domain 2 169 302 - -
Sto1g2144 323 SUPERFAMILY Heme-dependent peroxidases 30 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Sto1g2144 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Sto1g2144 323 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto1g2144 323 PANTHER PEROXIDASE 24 322 - -
Sto1g2144 323 CDD secretory_peroxidase 30 322 IPR033905 GO:0004601|GO:0042744
Sto1g2144 323 Gene3D - 34 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2144 Sto-Chr1 29642119 29644632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2144 30 323 Peroxidase AT5G05340 59.259 6.85e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2144 K00430 - gmx:100799894 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2144 1 29642119 29644632 Sto1g2144 1 29642119 29644632 ECH