Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto1g2143 | ATGGAGTTGATACTTAGAAAGCATCACGCTATTACTTTAGTGGTAGCATTATGGTGGATTCTCCTCATGCTTTCTTCATCTCATGCACAAAGCAACGAAGAAGCAAATGCATTGGTGAATTGGAAAGCCAGCTTTGACCAACAAAACCAATCTTTCCTCTCTTCATGGACGACCAATGGTACCAACACTAGTAGTAGTCCTTGCGCTTGGATGGGAATTACATGTGATGCATCCAATTACTCTGTTTTCCAAATATCTCTACCAAATATGGGATTAAGAGGTACGCTTCAAAGCTTCAATTTCTCATCTTTCCCCAATCTCCAATTCATTCATCTACAACAAAACTTGTTCTATGGCACCATCCCTCCCCACATTGGACAACTCTCAAGAATCACTTGGATTGATTTGAGTTTCAACAAGTTCAATGATACCATTCCAACCACTATTGGCAATTTGTCCAATACTCTTTCCCATCTtcatttgaataataataataataatctctaTGGACCAATTCCATCTGAGATCACACAACTAAATAGTCTTACTGAACTATGGTTAGGAGGAAATGTTTTCTATGCTCAAATCCCTCGAGATATAGGAGCTCTGAGCAATCTACATGTGCTCAACATTGACACAAgctatctttcagggactatcCCTACTTCTATTGGAAATTTAACTAGCTTGATATATTTGAATCTAAGGGGGAACAAGCTTCATGGCCAAATTCCTAAACAAATAGGCCAGTTGGTGAACCTGAACTTATTATGGCttctatataataatttatctgGTTCCATCCCCGAAGAAATTGGAATGATGAAACAACTTACTCAACttgatttttcaaaaaattatttgtctGGTAACATCCCTCCTACTATTGGAAACATGAGTAAATTGTATTACATTTACCTTTATGAGAATCAGATCTCAGGATCTATTCCATGGGAATTGGGGAAACTCCATGGCCTTCTGGTAATTCAACTATTTAGCAACAATCTCTCTGGTTCAATCCCATATTCTATTTGCAACTTGACAACAAGATTGAGTGATCTTCGCATTGAAGACAACCAACTTTCTGGATCAATTCCTTCTTGTATTGGAGACTTGAGTGTGCTCTCAAGACTTTCTATGCAGTTAAATAAACTTTCTGGACCAATCCCTGATTCAATTGGAAACTTGAGTCAACTCATTAGATTGATAATGAGCTTAAATTCATTTTCTAGATGCATCCCTAATTCAATTGGAAGGTTGAATAATCTCCAAACATTAGATTTGTCTAGAAATACACTTTCTGGACCAATCCCGGCTTCTATAGGAAACCTAAGCAATTTGGCTGGGCTTTCTATTTCTAGAAATGAAATTGTTGGAGCAATTCCTACAAGTATGAAGAACTTGTCAAGACTACAATTTCTTGATCTATCTTCAAATCGCCTCACAAAGATTCCAGAAGAATTAGGATTATTGCGAACAAGAATTGCATATTTGAATTTAGCCAAAAACCATTTCAGCGGCTCAATTCCTCCACAGCTGGGACAGTTGCTCAATTTACTCCAATTGAATCTAAGCCAAAACTCTTTCAACAGCATCCCTTCAAGTTTAGGGAATTTGACTTCTCTCCAAGATCTTGATTTAAGTAGAAATTCTTTATCGGGAGAGATTCCATTGAAGCTTGGAGCATTTCCAGGACTACAGAAGCTAAACATATCGCATAATAATCTCTCCGGTCCTATACCTTCCAACTTTGATACAATGTCAAGCCTGAATTCGATTGACATATCATACAATCAATTGGAAGGACCACTTCCCAATAGTCCAACTTTTCGTAATGCTTCAATGGAGAGATTGAGAAACAACAAAGAGCTTGCTTACACTATGAAAGTGGATGAGAAATGTGATGTTTTTAGTTTTGGAGTGCTGGTTTTGGAAATAGTTTTCGGAAAGCATCCGGGAGATCTCATGATTTCTTTTCCCGCGTCATCATCCTCATCTGTAGCAACAGAAGTTTCTGCAACCAATAATGTGCTATTGAGAGATGTGTTAGACCAAAGAATTCATTATCCTTCAAGCTCAATTGGTAGTGATGAGGATGTGATATTGATGGCGAAAATAGGCTTTTCTTGTGTGAAAACGAATCCTCGTTCACGTCCAACCATGGAGCAAGTTTGCAAGCAGTTTCTTAGGTCCAAATCACCTCTCTTACATCAATTTGACAATATCACACTTGCAGATCTCAACCAAATAGAATATTGA | 2259 | 0.3665 | MELILRKHHAITLVVALWWILLMLSSSHAQSNEEANALVNWKASFDQQNQSFLSSWTTNGTNTSSSPCAWMGITCDASNYSVFQISLPNMGLRGTLQSFNFSSFPNLQFIHLQQNLFYGTIPPHIGQLSRITWIDLSFNKFNDTIPTTIGNLSNTLSHLHLNNNNNNLYGPIPSEITQLNSLTELWLGGNVFYAQIPRDIGALSNLHVLNIDTSYLSGTIPTSIGNLTSLIYLNLRGNKLHGQIPKQIGQLVNLNLLWLLYNNLSGSIPEEIGMMKQLTQLDFSKNYLSGNIPPTIGNMSKLYYIYLYENQISGSIPWELGKLHGLLVIQLFSNNLSGSIPYSICNLTTRLSDLRIEDNQLSGSIPSCIGDLSVLSRLSMQLNKLSGPIPDSIGNLSQLIRLIMSLNSFSRCIPNSIGRLNNLQTLDLSRNTLSGPIPASIGNLSNLAGLSISRNEIVGAIPTSMKNLSRLQFLDLSSNRLTKIPEELGLLRTRIAYLNLAKNHFSGSIPPQLGQLLNLLQLNLSQNSFNSIPSSLGNLTSLQDLDLSRNSLSGEIPLKLGAFPGLQKLNISHNNLSGPIPSNFDTMSSLNSIDISYNQLEGPLPNSPTFRNASMERLRNNKELAYTMKVDEKCDVFSFGVLVLEIVFGKHPGDLMISFPASSSSSVATEVSATNNVLLRDVLDQRIHYPSSSIGSDEDVILMAKIGFSCVKTNPRSRPTMEQVCKQFLRSKSPLLHQFDNITLADLNQIEY | 752 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto1g2143 | 752 | SUPERFAMILY | Protein kinase-like (PK-like) | 623 | 732 | IPR011009 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 516 | 538 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 468 | 491 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 104 | 128 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 539 | 565 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 179 | 203 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 420 | 444 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 227 | 251 | IPR003591 | - | |
Sto1g2143 | 752 | SMART | LRR_typ_2 | 275 | 299 | IPR003591 | - | |
Sto1g2143 | 752 | SUPERFAMILY | L domain-like | 309 | 606 | - | - | |
Sto1g2143 | 752 | PRINTS | Leucine-rich repeat signature | 471 | 484 | - | - | |
Sto1g2143 | 752 | PRINTS | Leucine-rich repeat signature | 539 | 552 | - | - | |
Sto1g2143 | 752 | SMART | LRR_sd22_2 | 275 | 301 | - | - | |
Sto1g2143 | 752 | SMART | LRR_sd22_2 | 372 | 398 | - | - | |
Sto1g2143 | 752 | SMART | LRR_sd22_2 | 468 | 490 | - | - | |
Sto1g2143 | 752 | SMART | LRR_sd22_2 | 420 | 446 | - | - | |
Sto1g2143 | 752 | SMART | LRR_sd22_2 | 128 | 154 | - | - | |
Sto1g2143 | 752 | Gene3D | Ribonuclease Inhibitor | 194 | 291 | IPR032675 | - | |
Sto1g2143 | 752 | SUPERFAMILY | RNI-like | 85 | 386 | - | - | |
Sto1g2143 | 752 | Gene3D | Ribonuclease Inhibitor | 292 | 382 | IPR032675 | - | |
Sto1g2143 | 752 | Gene3D | Ribonuclease Inhibitor | 493 | 611 | IPR032675 | - | |
Sto1g2143 | 752 | Gene3D | Ribonuclease Inhibitor | 383 | 490 | IPR032675 | - | |
Sto1g2143 | 752 | ProSiteProfiles | Leucine-rich repeat profile. | 518 | 540 | IPR001611 | GO:0005515 | |
Sto1g2143 | 752 | Gene3D | Ribonuclease Inhibitor | 30 | 193 | IPR032675 | - | |
Sto1g2143 | 752 | Gene3D | Transferase(Phosphotransferase) domain 1 | 612 | 733 | - | - | |
Sto1g2143 | 752 | Pfam | Leucine rich repeat N-terminal domain | 32 | 76 | IPR013210 | - | |
Sto1g2143 | 752 | Pfam | Leucine Rich Repeat | 566 | 585 | IPR001611 | GO:0005515 | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 468 | 607 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 218 | 409 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 290 | 489 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 11 | 347 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 340 | 529 | - | - | |
Sto1g2143 | 752 | Pfam | Leucine rich repeat | 422 | 481 | IPR001611 | GO:0005515 | |
Sto1g2143 | 752 | Pfam | Leucine rich repeat | 495 | 552 | IPR001611 | GO:0005515 | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 340 | 529 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 11 | 347 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 218 | 409 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 468 | 607 | - | - | |
Sto1g2143 | 752 | PANTHER | DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 | 290 | 489 | - | - | |
Sto1g2143 | 752 | ProSiteProfiles | Leucine-rich repeat profile. | 470 | 491 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto1g2143 | Sto-Chr1 | 29639484 | 29641919 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto1g2143 | 20 | 625 | Receptor kinase-like Gene Family | AT4G08850 | 38.052 | 1.24e-120 | 384 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Sto1g2143 | LRR_8 | 3.2e-09 | CL0022 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto1g2143 | - | K13468 | psom:113346068 | 439.113 |