Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2140 atgggttttggagTGAGGAAGTCGTACACAAACAAGAGCAAAAAAGATGGCTCTATCATGACGGTTCGATTCGTTTGTAACAAGGAAGGGTTGAGAGGGAAAGATAAAAGAGATCATCTTACTAAGAATCCCCGGCGAGAAACAAGAACAGATTGTAAGGTTAGAATAGGACTCACACATGTGGATGGAATATTTAGAATCTATGACTTCATAGAGGATCATAATCATGTTCTTCAAACTCCAAAAACAACTCATATGTTGGCCTCTCAACGAAAGATATCAAAAGTTCAAGCACTTGAGATTGAGTTGGCTGAAGATTCCGGGTTGCAACTAAGAACATCATATGAGTTGTCCAGCAGACATGCGGGCGGAAAAGATAATCTTGGCTACACTCGTTTAGATCAGAAAAACTATCTCCGAACTATAAGAAAAAGGAGTTTGATGTATGGGGAAGCTGGTTGGTTGCTAAGATATTTCAAAAAGCAGAACTTGAAAAATCCATCATATTACCATGATTATCAGATGGATAGTGAAGaacaaataactaatatattttgGGCTGACCCTAAAATGCTTTTGGACTACAGTTATTTTGGTGACGTGGTTTCTTTGGACACAACATATTGTATTAACAATGCACATAGGCCACTTGCtatattttcaggatttaatcaTTTCAGGGGAGTGGTGATTTTTGGAGCTGCTTTACTATATGATGAGACAGCGTCATCCTTTAAGTGGTTGTTTAAAACATTTTTGGAAGCAAATTTGCAGAAAAAGCCTCAGACCATATTCACTGACCAAGATCAAGCAATGGCTAAAGCATTACACGAGGTTATGCCTGAGGTGCTTGAAGTGAATGGAGTTATGACTATTCCTGATCAGTACATTTTGAAGAGATTGACTAAAGATGCTCGAAGTGGTGCTATAGAGGATGTTAATGGAAACAAAGTTGTGGAAGATCCTGATTCAGTTGGCACGATACGACATAGACAACTTTGGCCGAAGCTAGTTAAGTTAGCATCAGACGTGAGTAATTCTGAACAAGCGTTCTTATTGGACAATGAAGCTGTAAATCAAGTGAACTTTGAGGTGCCTAAAATCTATGGGAATCAAGTGAACTTTGAGACGCCTCAAGGATCTAGCAATCAAATGAACTTTGAGGTGCCTCCAAATTTGGGGACTCAATTTAGTTTCACCAAGTTTTTGATGgaGCCATTCTCTACACAGTCACTTGAAGGATCAGAGTTCTATGGTGATTTTTCAAATGTCAATGACCAAAGCTAG 1287 0.3753 MGFGVRKSYTNKSKKDGSIMTVRFVCNKEGLRGKDKRDHLTKNPRRETRTDCKVRIGLTHVDGIFRIYDFIEDHNHVLQTPKTTHMLASQRKISKVQALEIELAEDSGLQLRTSYELSSRHAGGKDNLGYTRLDQKNYLRTIRKRSLMYGEAGWLLRYFKKQNLKNPSYYHDYQMDSEEQITNIFWADPKMLLDYSYFGDVVSLDTTYCINNAHRPLAIFSGFNHFRGVVIFGAALLYDETASSFKWLFKTFLEANLQKKPQTIFTDQDQAMAKALHEVMPEVLEVNGVMTIPDQYILKRLTKDARSGAIEDVNGNKVVEDPDSVGTIRHRQLWPKLVKLASDVSNSEQAFLLDNEAVNQVNFEVPKIYGNQVNFETPQGSSNQMNFEVPPNLGTQFSFTKFLMEPFSTQSLEGSEFYGDFSNVNDQS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2140 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 283 384 IPR031052 GO:0006355
Sto1g2140 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 282 IPR031052 GO:0006355
Sto1g2140 428 Pfam FAR1 DNA-binding domain 1 79 IPR004330 -
Sto1g2140 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 282 - -
Sto1g2140 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 283 384 - -
Sto1g2140 428 Pfam MULE transposase domain 201 283 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2140 Sto-Chr1 29620775 29623152 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g2140 MULE 4.4e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2140 - - cam:101505629 375.941